Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g00729 ATGCAAAGGAACGTCAACAGCGGCGGCACAATGGCGGCTCAGCCAGCATGCGCTGCCTGCAAGCATCAGAGGAAGAAGTGCGACGACGCTTGCACACTGGCCCCATATTTTCCGGCAGACAGAACCAGAGAGTTCCAAGCCGTGCACCGAGTTTTCGGGGTGAGCAACGTGACGAAGCTGGTGAAAAACGTGAGCGAAATGGATCGAAACAAGACGGTGGATTCGTTAATCTGGGAAGCCCTGTGCAGGCAGAAGGATCCCGTTTCAGGTCCTTACGGAGAATACAGAAGAATTTACGACGAACTAAAGCTGTACAGAAGCCTAAACCAGACCCAAATGCTGAAAATAGCTGGGGTGGGGATGGGATGGAACAGTTCATACGGGATAAATAACAAACCCAACAATGGAAATGGAGGGGGAATTATGAACAGTACTAGTCATGGCATAAGCTACAGCAACAGTCATGATAATTGGAGTTCTATCATTGATTCTAGTCCTAATAGTTATCCTTCAACTTATACTCAAAGTCCAGAAATTTTACGTAGCGAAAGAGAGGCTTCGTCGGTTGTTCTTCCACTTCAACACCAATCCCAGCAGTGCCATCTCCCCATCAATGGCCTTACGTTCCAGCAATACTATCTTTCAGGTCAAGGAAGCCCTATCAACAGCAAGACCATGCACAGTTCTATTCTATGGGAGGGATCAGGACCGTGA 714 48.04 MQRNVNSGGTMAAQPACAACKHQRKKCDDACTLAPYFPADRTREFQAVHRVFGVSNVTKLVKNVSEMDRNKTVDSLIWEALCRQKDPVSGPYGEYRRIYDELKLYRSLNQTQMLKIAGVGMGWNSSYGINNKPNNGNGGGIMNSTSHGISYSNSHDNWSSIIDSSPNSYPSTYTQSPEILRSEREASSVVLPLQHQSQQCHLPINGLTFQQYYLSGQGSPINSKTMHSSILWEGSGP 237
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 17804876 17805757 - Bpe001660.1 Bpe15g00729 116408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g00729 237 Pfam Lateral organ boundaries (LOB) domain 16 105 IPR004883 -
Bpe15g00729 237 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 11 226 - -
Bpe15g00729 237 ProSiteProfiles LOB domain profile. 15 115 IPR004883 -
Bpe15g00729 237 PANTHER LOB DOMAIN-CONTAINING PROTEIN 2 11 226 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe15g00729 Bpe-Chr15:17804876 Bpe11g01042 Bpe-Chr11:7773367 1.10E-22 dispersed
Bpe15g00729 Bpe-Chr15:17804876 Bpe15g01233 Bpe-Chr15:20922408 1.76E-21 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22611 PF03195 LOB 3.70E-32 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g00729 - - mnt:112092179 230.335