Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g00763 ATGGGTTTGTCCAGTCTTCCTGCTCCATCCTCAGGAGTCCTCTGCATACTTGTAATAAACACTGCCTTCTGCATTTCCATCTTCAAAGCCGTTCTTCAATCAATTCTTCACGTCGTCGGCATTGAAATCTCATCGCCCTCTCCGCCACCGCCTTCAATCTGGGTTGAAAACTACTCAGAACCCATTGAGTTTCATCTCGATTCCTCGTGCAATTACGTCGAGAAGTTCCGCGACCTTATTCCGGTGGTTCGGTTTGAAGAAGCACTAGCCTGTAAATTTTCAGAGCACGAATGCTCAGTTTGCCTCACTCAGTTTGAACCCAGATCAGAGATAAACCGCTTGTCTTGCGGCCATTTATTCCACAAAATGTGCTTGCAGAAGTGGTTGGCCTATTCGAATTTTACGTGCCCTCTTTGCCGGATTCCTCTAATGGGGGAAAAAGAGAGACTTCATGCTTTTGATGAAGGTTTATCATATTCCTCTTAG 486 45.68 MGLSSLPAPSSGVLCILVINTAFCISIFKAVLQSILHVVGIEISSPSPPPPSIWVENYSEPIEFHLDSSCNYVEKFRDLIPVVRFEEALACKFSEHECSVCLTQFEPRSEINRLSCGHLFHKMCLQKWLAYSNFTCPLCRIPLMGEKERLHAFDEGLSYSS 161
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 17984259 17984744 - Bpe001692.1 Bpe15g00763 116442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g00763 161 Pfam Ring finger domain 97 140 IPR001841 -
Bpe15g00763 161 SUPERFAMILY RING/U-box 82 144 - -
Bpe15g00763 161 PANTHER E3 UBIQUITIN-PROTEIN LIGASE XERICO-RELATED 1 148 - -
Bpe15g00763 161 ProSiteProfiles Zinc finger RING-type profile. 98 140 IPR001841 -
Bpe15g00763 161 SMART ring_2 98 139 IPR001841 -
Bpe15g00763 161 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 75 145 IPR013083 -
Bpe15g00763 161 PANTHER - 1 148 IPR044249 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe07g00667 Bpe15g00763 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g00663 Bpe-Chr11:5093079 Bpe15g00763 Bpe-Chr15:17984259 2.36E-15 dispersed
Bpe15g00763 Bpe-Chr15:17984259 Bpe05g00651 Bpe-Chr5:20298763 3.70E-13 dispersed
Bpe04g00928 Bpe-Chr4:6211526 Bpe15g00763 Bpe-Chr15:17984259 2.95E-07 transposed
Bpe15g00763 Bpe-Chr15:17984259 Bpe07g00667 Bpe-Chr7:13366502 3.00E-52 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g00763 K16285 - twl:119992309 185.652