Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g00782 ATGGCGACGGCGCAGAATCAAGCGCCGAATACGGATCTATTTGATGCCTATTTTCAGCGAGCTGATTTGGACCGGGATGGTCGTATTAGTGCTGCCGAAGCTGTCGCTTTCTTCCAAGGCTCTGGATTGTCTAAACAGGTCCTTGCGCAGATATGGGCATTGGCTGATCCGAGGCAGATTGGTTTCCTTGGTCGATCAGAGTTTTATAATGCTCTTAAACTGACTACGGTGGCACAAAAAAAGTGGGAACTAACTCCTGAAATTGTGAAAACAGCATTATATGGGCCGGCTTCAGCTAAAATACCAGCACCACAAATGAATGTAACGGCCATGCCACCATCTCAGCTCAATATTGCTACAGCATCAACTGCCTCTCAGATTGGGACCGGCACTCCAACATCCTCCCAAAACATTGCATTTAGAGGACCGCCAGTTGCTTCAGCTGTTGGTATAAATCAGCAACAAGTTTCTTTGCAAGCAAATCAATTAATAAGGGCACCGCAATCTACATCAATGACCAATTCCATGCCTGTCCAAATTATTGGCACACCAGGATTTCCAGAAAGTGGCATTGTTGGAAGGAATTCCTCTCCAAGCACTAGCCTCTCGAGTGATTGGGTTGGTGGGCGAGTTGGAGTTCAGGGAATTCCCTCGCAAGTTCCTGACAAAGGAGTTGTTTCTTCCACTTCTCAACTTGGGTTAGGAGTATCAACATCAGCGTCCACAGCTTCACTACCACCTAGACCTCCACCCTCTGGTATAAGACCTTCTGGACCACCAACTAAGGATTCAAGAATGGTGGGTATTTCTGGTAATGGTGTTGCTTCCAACTCATTTTTTGGAGATGATGTATTTTCTGCTACTCCAACTCCCCTGAGCCAAGATTCTTCCTCCGGGGGCATTTTATCGGCCAATATTCCAAGACCACCTGGGATACATTCTTCATTAAGGCCCAGTGTTGATTCTACTGGGAGTTCATTCCTGAAACAACCTGATGGTGGTCACCTCAAGCAGCCTCAGGTAGTTTTCAGGTCAAATCAACAGGTCTTAACTCAGCCTTCTTTGTCTGGACCTTCTCCCGTGTCAGAGATCTCTGTTTCCAGTCAGTCCCCACATCCATGGCCTAGCATGACACAGAATGATGTTCAGAAGTATACCAAGGTGTTTGTTGAAGTAGACAAAGATAGAGATGGAAAAATTACTGGGGCAGAAGCGCGAGATTTGTTTTTGAGTTGGAGAATGCCAAGAGAGATATTAAAGCAGGTGTGGGACTTATCCGATCAAGATAACGATAGCATGCTTTCTCTCAGGGAGTTCTGCATTGCTCTATATTTAATGGAGAGGTACAGAGAAGGTCGTCCTCTTCCAGCTGCATTTCCGAGCAACGTCATGCCTAATTTTCCTAACAGTACTCCTAGGACAAACTATAATAGTGCTGCTTGGGGACCTAGATCTGAATTCCAGCAACAGAAAGGGGTTTCTGCTTCTGATACTCACTCAGCCCGTGATACTGGAGTAACAGTTGGGCCTTCGATTCTACCTTCTGTCCCCAGTGCAGATGAAGTGTTACAGATTAAGGAGCAGAAATCAAAAGTGCCAGTATTAGAGAAACACCTTGTCAATCAACTTAGTACAGAGGAGCAGAACTCACTTAACATGAAGTTCCAAGATGCTACAGATGCTGAGAAAAAGGCACTCATTTCTCTCTCGTGCCCTTTCTCAATGTGTTTGCTTTTGTTTCTTATGAACATTTCGTCAATCATTTGTTTACATGATTTATTTTATTGGCTGCAGGTTGAAGAACTGGAGAAAGAAATCTTAGAGTCAAAAGAGAAAATTGAATTTTATCGTGCTAAAATGCAGGAACTTTTATACCATGACTTAATTCTTTTTTTTTTTTTTTTTTATCAGATTCTTTACAAGAGTAGATGTGACAATCGGCTTAATGAGCTCACAGAACGGGTGTCTGCAGATAAACGCGAGGCTGATTCTCTTGCAAAGAAATATGAAGAAAAGTATAAACAAATTGGAGATGTAGCTTCCAAGTTAACGATTGAAGAAGCAACCTTTCGGGATATACAGGAGAGGAAGATGGAGTATTACCAAGCAATTATAAAATTGGACCAAGATGGCAATGCTGATAATATTCAGGTTCGTGCTGATAGTGTACAATCAGATATTGATGAGTTAGTGAAAATTCTCAACGAGCGATGCAAGACTTATGGATTGCGTACAAAGCCTACTACTTTAACTGAACTTCCTTTTGGTTGGCAACTTGGTATCCAAGAAGGCTCTGCTGACTGGGATGAAGAATGGGATAAGTTTGATGATGAAGGATTTACTTTTGTGAAGGAGCTTACTCTTGATGTGCAGAATGTGTTGGCTCCTCCTAAACAGAAATCAAAGTCCATTCAAAATGAGCAAAGTTTGGCAGTTGATAGTCCAGGAATAGCATCCTTATCTGACGCTAAAGCCAATGGAGAAAAGCCCCATATTACTGATGAAGCAGTTGTAAATGTAACAAACAATACAAAAAGTGAACCTGAATCTGTAAAAAGTGTTCCTAGTAGCCCAGTTGGTAGTAGTGCTACTGAAAGTCCAAGGGAATTTTCAGAATCTATCTTTAGAAAGACTTCTGGGTTTGATGTATCGCCACGGAATAAAGAAATCCAAAGCATTATGTCATGTTTTTTTAGTGATCATGAAGGAGCAGGATCTCCATATTTTGGGGACAAGAGTTTTGATGAACCGACGTGGGGATCATTTGACACTAATGATGACATTGACTCCGTGTGGGGCTTTAACACAGTTAATGCGACCAAGGATTTGGGTCATGCTAGTAGTAGTAGAGACAACTACTTTTTCGAGTCTGGAGATTTTGGTCTAAATCCCATCAGAACAGATGTATCACATTCCAATGCCTCTGCTCAGAAGAAAGGCGGATTTAGTTTTGACGAGTCTGTTCCTAGTACACCACTTTTCAGTTCAGGCAATTCACCGCATGGTTCAGAACATAATTTTGACAGTTTTTCTAGATTTGATTCCTTCCGAATGCAAGATAGTGGACTTTTCTCCCAGCGAGAAACACTAGCTCGATTCGATTCAATGCGAAGCAGTAAAGACTTTGATCATGGCCATAGATTTCCACCGTTAGATGATTCAGACCCTTTTGGTTCTTCAGGGCCATTTAGAACATCGCAAGAGAATCAAACTCTGAGAAGAGGATCAGACAATTGGAGTGCCTTCTAG 3249 42.38 MATAQNQAPNTDLFDAYFQRADLDRDGRISAAEAVAFFQGSGLSKQVLAQIWALADPRQIGFLGRSEFYNALKLTTVAQKKWELTPEIVKTALYGPASAKIPAPQMNVTAMPPSQLNIATASTASQIGTGTPTSSQNIAFRGPPVASAVGINQQQVSLQANQLIRAPQSTSMTNSMPVQIIGTPGFPESGIVGRNSSPSTSLSSDWVGGRVGVQGIPSQVPDKGVVSSTSQLGLGVSTSASTASLPPRPPPSGIRPSGPPTKDSRMVGISGNGVASNSFFGDDVFSATPTPLSQDSSSGGILSANIPRPPGIHSSLRPSVDSTGSSFLKQPDGGHLKQPQVVFRSNQQVLTQPSLSGPSPVSEISVSSQSPHPWPSMTQNDVQKYTKVFVEVDKDRDGKITGAEARDLFLSWRMPREILKQVWDLSDQDNDSMLSLREFCIALYLMERYREGRPLPAAFPSNVMPNFPNSTPRTNYNSAAWGPRSEFQQQKGVSASDTHSARDTGVTVGPSILPSVPSADEVLQIKEQKSKVPVLEKHLVNQLSTEEQNSLNMKFQDATDAEKKALISLSCPFSMCLLLFLMNISSIICLHDLFYWLQVEELEKEILESKEKIEFYRAKMQELLYHDLILFFFFFYQILYKSRCDNRLNELTERVSADKREADSLAKKYEEKYKQIGDVASKLTIEEATFRDIQERKMEYYQAIIKLDQDGNADNIQVRADSVQSDIDELVKILNERCKTYGLRTKPTTLTELPFGWQLGIQEGSADWDEEWDKFDDEGFTFVKELTLDVQNVLAPPKQKSKSIQNEQSLAVDSPGIASLSDAKANGEKPHITDEAVVNVTNNTKSEPESVKSVPSSPVGSSATESPREFSESIFRKTSGFDVSPRNKEIQSIMSCFFSDHEGAGSPYFGDKSFDEPTWGSFDTNDDIDSVWGFNTVNATKDLGHASSSRDNYFFESGDFGLNPIRTDVSHSNASAQKKGGFSFDESVPSTPLFSSGNSPHGSEHNFDSFSRFDSFRMQDSGLFSQRETLARFDSMRSSKDFDHGHRFPPLDDSDPFGSSGPFRTSQENQTLRRGSDNWSAF 1082
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 18083913 18093086 - Bpe001709.2 Bpe15g00782 116461

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g00782 1082 SUPERFAMILY EF-hand 11 90 IPR011992 -
Bpe15g00782 1082 SMART efh_1 384 412 IPR002048 GO:0005509
Bpe15g00782 1082 SMART efh_1 418 446 IPR002048 GO:0005509
Bpe15g00782 1082 SMART efh_1 13 41 IPR002048 GO:0005509
Bpe15g00782 1082 SMART eh_3 2 98 IPR000261 GO:0005515
Bpe15g00782 1082 SMART eh_3 373 469 IPR000261 GO:0005515
Bpe15g00782 1082 ProSiteProfiles EH domain profile. 381 470 IPR000261 GO:0005515
Bpe15g00782 1082 Pfam Cytoskeletal-regulatory complex EF hand 376 446 IPR000261 GO:0005515
Bpe15g00782 1082 ProSiteProfiles EH domain profile. 10 100 IPR000261 GO:0005515
Bpe15g00782 1082 MobiDBLite consensus disorder prediction 1039 1082 - -
Bpe15g00782 1082 MobiDBLite consensus disorder prediction 842 868 - -
Bpe15g00782 1082 CDD EH 385 451 IPR000261 GO:0005515
Bpe15g00782 1082 MobiDBLite consensus disorder prediction 237 266 - -
Bpe15g00782 1082 Coils Coil 599 619 - -
Bpe15g00782 1082 ProSiteProfiles EF-hand calcium-binding domain profile. 9 44 IPR002048 GO:0005509
Bpe15g00782 1082 CDD EH 14 80 IPR000261 GO:0005515
Bpe15g00782 1082 PANTHER CALCIUM-BINDING EF HAND FAMILY PROTEIN 7 564 - -
Bpe15g00782 1082 Gene3D - 5 102 - -
Bpe15g00782 1082 PANTHER EH DOMAIN 599 1082 - -
Bpe15g00782 1082 SUPERFAMILY EF-hand 371 467 IPR011992 -
Bpe15g00782 1082 MobiDBLite consensus disorder prediction 310 334 - -
Bpe15g00782 1082 Pfam EF hand 15 33 IPR002048 GO:0005509
Bpe15g00782 1082 Gene3D - 376 466 - -
Bpe15g00782 1082 PANTHER EH DOMAIN 7 564 - -
Bpe15g00782 1082 Coils Coil 648 668 - -
Bpe15g00782 1082 MobiDBLite consensus disorder prediction 351 379 - -
Bpe15g00782 1082 PANTHER CALCIUM-BINDING EF HAND FAMILY PROTEIN 599 1082 - -
Bpe15g00782 1082 ProSiteProfiles EF-hand calcium-binding domain profile. 380 415 IPR002048 GO:0005509
Bpe15g00782 1082 MobiDBLite consensus disorder prediction 1059 1082 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g00782 K12472 EPS15; epidermal growth factor receptor substrate 15 - jre:109006655 1080.86
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00268 Bpe-Chr2:1803449 Bpe15g00782 Bpe-Chr15:18083913 1.80E-22 dispersed
Bpe08g01114 Bpe-Chr8:13147235 Bpe15g00782 Bpe-Chr15:18083913 9.20E-07 dispersed
Bpe15g00782 Bpe-Chr15:18083913 Bpe09g00155 Bpe-Chr9:1048257 5.36E-06 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g298 . . . . . . . . Cmo19g00819 Cmo11g01788 . . . . Sed05g2162 Cpe04g00633 Cpe15g00643 Bhi05g01580 Tan02g0572 Cmetu01g1669 Lac12g0474 . . . Cla02g00345 Cam02g0354 Cec02g0355 Cco02g0361 Clacu02g0346 Cmu02g0343 Cre02g0675 Cone12ag1298 Cone8ag1333 . . . Csa07g00188 . Cme01g01145 Blo04g00607 Blo13g00472 . Bda14g00649 Bpe15g00782 . Bma03g00639 Bma08g00716 . . . Cma11g01331 Cma19g00799 Car11g01415 Car19g00615 . . . . . . . . . . . . . . . . Lsi11g01287 . Chy01g00592 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004902 2 2 2 2 1 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 3 1 1 41
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe15g00782 Bpe_Chr15 FPKM 34.500549 36.458618 31.57667 29.760349 18.221739 21.821529 21.794031 27.933268 29.853678 30.257347