Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g00792 ATGGCTTTGTTTATCTGCTTTCTCTTTTTTCTAGTTTCCTCTGTTACTGCTTGTGATCGCTGTGTGCATCAGACCAGAGCTGCTTATTTCTCCAAAGCTTCCTCTCTTTCTTCTGGAGCTTGTGGGTATGGCTCATTGTCACTGGGCTTCAACCGTGGACATCTTGCAGCCGGTGCGCCTTCCCTTTACAAAGATGGAGCTGGTTGTGGTGCTTGCTTTCAGATAAGATGCAAGAACACGACTCTTTGCACAAGATCGGGGACGAAAGTGATTTTGACTGATCTCAATACAAATAACGAAACAGATTTTGTTCTGAGCAGCAGAGCCTTTACAGCAATGGCTCAAAAGGGTATGACCATGGACATTCTGAGACACGGAGTTGTTGACGTGGAATATAAGAGAGTACCATGCGAGTATAAAAATCAAAACTTGGCCGTGAGAGTCGAAGAATCGAGCAAAAAACCACATTATCTAGCAATCAAGTTCCTATACCAAGGTGGTCAGACAGCAATAGTTGGCGTTGATGTTGCTCAGCAGGTGGGTTCTTCAAATTGGAGCTTCTTGAGTAGAAAGCATGGCGCTGTGTGGGATACAAGTAGAGTCCCAGACGGAGCTCTGCAATTCCGCATGGTGGTGACTTCTGGGTACGACGGAAAATGGATCTGGGCAAAGAGTGTTCTTCCTGAAGACTGGAAATCAGGCCTCACATATGATTCTGGAGTTCAAATCAATGACATCGCACAAGAGGGTTGCTTTCCTTGCAAACTGGAAAACTGGAAATGA 783 45.34 MALFICFLFFLVSSVTACDRCVHQTRAAYFSKASSLSSGACGYGSLSLGFNRGHLAAGAPSLYKDGAGCGACFQIRCKNTTLCTRSGTKVILTDLNTNNETDFVLSSRAFTAMAQKGMTMDILRHGVVDVEYKRVPCEYKNQNLAVRVEESSKKPHYLAIKFLYQGGQTAIVGVDVAQQVGSSNWSFLSRKHGAVWDTSRVPDGALQFRMVVTSGYDGKWIWAKSVLPEDWKSGLTYDSGVQINDIAQEGCFPCKLENWK 260
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 18164351 18166200 - Bpe001719.1 Bpe15g00792 116471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g00792 260 PANTHER EXPANSIN-B3 5 256 - -
Bpe15g00792 260 Gene3D - 12 138 IPR036908 -
Bpe15g00792 260 SUPERFAMILY Barwin-like endoglucanases 6 141 IPR036908 -
Bpe15g00792 260 PRINTS Expansin/Lol pI family signature 185 199 IPR007118 GO:0005576
Bpe15g00792 260 PRINTS Expansin/Lol pI family signature 125 141 IPR007118 GO:0005576
Bpe15g00792 260 PRINTS Expansin/Lol pI family signature 225 239 IPR007118 GO:0005576
Bpe15g00792 260 PRINTS Expansin/Lol pI family signature 37 55 IPR007118 GO:0005576
Bpe15g00792 260 PRINTS Expansin/Lol pI family signature 59 77 IPR007118 GO:0005576
Bpe15g00792 260 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 38 142 IPR007112 -
Bpe15g00792 260 Pfam Lytic transglycolase 56 132 IPR009009 -
Bpe15g00792 260 Pfam Expansin C-terminal domain 145 228 IPR007117 -
Bpe15g00792 260 Gene3D - 139 244 IPR036749 -
Bpe15g00792 260 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 156 239 IPR007117 -
Bpe15g00792 260 SMART dpbb_1 56 132 IPR007112 -
Bpe15g00792 260 PANTHER EXPANSIN-LIKE A1-RELATED 5 256 - -
Bpe15g00792 260 SUPERFAMILY PHL pollen allergen 143 239 IPR036749 -
Bpe15g00792 260 PRINTS Major pollen allergen Lol pI signature 114 129 IPR005795 GO:0005576|GO:0019953
Bpe15g00792 260 PRINTS Major pollen allergen Lol pI signature 163 178 IPR005795 GO:0005576|GO:0019953
Bpe15g00792 260 PRINTS Major pollen allergen Lol pI signature 147 162 IPR005795 GO:0005576|GO:0019953
Bpe15g00792 260 PRINTS Major pollen allergen Lol pI signature 57 68 IPR005795 GO:0005576|GO:0019953
Bpe15g00792 260 PRINTS Major pollen allergen Lol pI signature 215 232 IPR005795 GO:0005576|GO:0019953
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe15g00792 Bpe-Chr15:18164351 Bpe13g00776 Bpe-Chr13:14224068 1.03E-30 dispersed
Bpe08g01445 Bpe-Chr8:15202554 Bpe15g00792 Bpe-Chr15:18164351 7.63E-55 transposed
Bpe11g00625 Bpe-Chr11:4802085 Bpe15g00792 Bpe-Chr15:18164351 7.98E-40 transposed
Bpe12g00139 Bpe-Chr12:1030370 Bpe15g00792 Bpe-Chr15:18164351 2.36E-168 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g00792 - - jre:109006647 430.639