Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g00817 CCGATGGCGTTACCAGTGGTTGATACTGATTACCTTAAGGAGATTGACAAGGCTCGTCGCGACCTCCGAGCTCTCATTGCTTTCAGGAACTGCGCTCCCATCATGCTCCGCTTAGCGTGGCATGATGCTGGTACTTATGATGTAAAGACAAAGACTGGTGGAGCAAATGGATCAATTCGAAACGAGGAAGAGTTTTCTCACGGTTGTAACAGCGGTTTGAAAAAAGCCATTGATTTTTGTGAGGAAGTGAAATCCAAATATCCAAAGATTACCTATGCTGACCTTTACCAGCTTGCTGGTGTTGTTGCTGTTGAGGTTACCGGAGGCCCAACTGTGAACTTTATTCCTGGAAGAAGGGACTCAAAAGTTTCCACTAGGGAAGGTCGTCTTCCAGACGCTACACTAGGTTGTTCTCATCTTCGGGACATATTCTACAGGATGGGTCTTACTGACAAAGATATTGTTGCATTATCTGGGGCGCACACACTGGGAAGGGGACATCCAGAAAGATCAGGTTTTGAAGGCCCTTGGACGCATGACCCTCTGAAGTTTGACAACTCGTATTTTGTGGAATTGTTGAAAGGAGAATCAGAGGGTCTATTAAAACTTTCAACTGATAAGTCTCTATTGGATGATCCGGAGTTCCGACCTTATGTCGAACTCTATGCCAAGGACAACGATGCATTCTTCAGAGACTATGCCGAATCTCATCAGAAACTTTCGGAATTAGGATTCAGTCCAAGGTCAACTACCAAGGCCATCATCAACGACAGCACTGTGTTGGCTCAAAGTGCAGTTGGTGTCGCAGTTGCAGCTGCAGTGGTAATCCTGAGCTACCTCTACGAAGTGCGCAAAAAAATGAAGTAA 867 45.67 PMALPVVDTDYLKEIDKARRDLRALIAFRNCAPIMLRLAWHDAGTYDVKTKTGGANGSIRNEEEFSHGCNSGLKKAIDFCEEVKSKYPKITYADLYQLAGVVAVEVTGGPTVNFIPGRRDSKVSTREGRLPDATLGCSHLRDIFYRMGLTDKDIVALSGAHTLGRGHPERSGFEGPWTHDPLKFDNSYFVELLKGESEGLLKLSTDKSLLDDPEFRPYVELYAKDNDAFFRDYAESHQKLSELGFSPRSTTKAIINDSTVLAQSAVGVAVAAAVVILSYLYEVRKKMK 288
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 18301489 18304933 + Bpe001743.1 Bpe15g00817 116496

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g00817 288 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 2 288 IPR044831 GO:0004601|GO:0034599
Bpe15g00817 288 Gene3D Peroxidase, domain 2 131 237 - -
Bpe15g00817 288 CDD ascorbate_peroxidase 5 245 - -
Bpe15g00817 288 Pfam Peroxidase 19 225 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bpe15g00817 288 PRINTS Plant ascorbate peroxidase signature 108 120 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bpe15g00817 288 PRINTS Plant ascorbate peroxidase signature 147 168 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bpe15g00817 288 PRINTS Plant ascorbate peroxidase signature 11 31 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bpe15g00817 288 PRINTS Plant ascorbate peroxidase signature 32 47 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bpe15g00817 288 PRINTS Plant ascorbate peroxidase signature 169 193 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bpe15g00817 288 PRINTS Plant ascorbate peroxidase signature 129 146 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bpe15g00817 288 PRINTS Plant ascorbate peroxidase signature 50 60 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bpe15g00817 288 PRINTS Plant ascorbate peroxidase signature 64 88 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bpe15g00817 288 PRINTS Plant ascorbate peroxidase signature 89 107 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bpe15g00817 288 PRINTS Plant ascorbate peroxidase signature 221 245 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bpe15g00817 288 ProSitePatterns Peroxidases proximal heme-ligand signature. 153 163 IPR019793 -
Bpe15g00817 288 PRINTS Haem peroxidase superfamily signature 153 168 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bpe15g00817 288 PRINTS Haem peroxidase superfamily signature 108 120 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bpe15g00817 288 PRINTS Haem peroxidase superfamily signature 177 192 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bpe15g00817 288 PRINTS Haem peroxidase superfamily signature 32 46 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bpe15g00817 288 PRINTS Haem peroxidase superfamily signature 90 107 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bpe15g00817 288 SUPERFAMILY Heme-dependent peroxidases 10 254 IPR010255 GO:0004601|GO:0006979|GO:0020037
Bpe15g00817 288 ProSiteProfiles Plant heme peroxidase family profile. 32 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bpe15g00817 288 PANTHER L-ASCORBATE PEROXIDASE 4, PEROXISOMAL-RELATED 2 288 - -
Bpe15g00817 288 ProSitePatterns Peroxidases active site signature. 32 43 IPR019794 GO:0004601
Bpe15g00817 288 Gene3D - 18 244 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g00817 K00434 E1.11.1.11; L-ascorbate peroxidase [EC:1.11.1.11] - csv:101206941 464.922
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00160 Bpe-Chr1:940059 Bpe15g00817 Bpe-Chr15:18301489 6.71E-109 dispersed
Bpe02g01647 Bpe-Chr2:19222704 Bpe15g00817 Bpe-Chr15:18301489 2.33E-80 dispersed
Bpe10g00164 Bpe-Chr10:4011412 Bpe15g00817 Bpe-Chr15:18301489 3.12E-133 dispersed
Bpe14g00386 Bpe-Chr14:3623512 Bpe15g00817 Bpe-Chr15:18301489 1.87E-76 dispersed
Bpe14g00580 Bpe-Chr14:4895044 Bpe15g00817 Bpe-Chr15:18301489 7.41E-30 dispersed
Bpe15g00817 Bpe-Chr15:18301489 Bpe12g00579 Bpe-Chr12:11581470 1.67E-19 dispersed
Bpe15g00817 Bpe-Chr15:18301489 Bpe08g00133 Bpe-Chr8:693574 6.80E-102 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g152 . . . . . . . . Cmo19g00742 . . . . . Sed05g2222 . Cpe15g00587 Bhi05g01726 Tan02g0695 Cmetu01g1029 . Hepe02g0430 . . . . . . . . . Cone12ag1229 Cone8ag1280 . . . Csa07g00093 . Cme01g01269 Blo04g00564 . . Bda14g00613 Bpe15g00817 . Bma03g00605 . . . . . . . Car19g00563 . . . . . . . . . . . . . . . . Lsi11g01196 . Chy01g00685 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002255 2 2 2 1 2 2 3 2 2 2 1 2 1 2 2 3 2 4 3 2 2 2 2 2 2 1 2 3 4 1 63
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe15g00817 Bpe_Chr15 FPKM 6.257557 7.118934 7.02007 8.037779 6.994198 7.699177 8.082687 8.148233 7.308208 8.402354