Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g00822 TTATGTTTATCTAGAAAGTTGGAAGCAAAAGTTGAGGATTTTGTGATGGACATTGGAGCCGATATTGTTGATGGCTTGCACACGGGGGGCACAAAGAGTTTGGGAACTTCTGACGAGAGGGTAGAGGAGAGAGGTGTTTTTGAGGATACAATGAATGCAGAGGAAGATTTTCTGGAACAGAGGATGAATTCTGACTCTGCAGACGCCGCTGTTAATGAAGAAGGAGAGGAGCAATCAGCTGGCATGGTTTATGAGGATCCTAATTCTGTTTATGAGGTTGATAAATTTGAAGAGGCAACAGATGGTTTAAGTTTGACGTCGCAAAATTGGGAGGAAGTCAATGATGAAGGGAAACCCTCCTTAATCACTACAAAGGAGGAAGTTTATGATGATGGAGCTTCTGTTCTAGAGCCTATAGCGACTTGTGTCGTTGATGAGGAAGGTTCCGAGGTGAAAGTAAAGTCTGCATTCAATGAGTTGCCTAATGGATTAAGTAGTCACGAAGAAGGGGGAAAAGAATTTTCTCAAGTTGGTGCTAGGAATGAGGGTGAAATTTTGGATGAGGATGAGACTGATGATGTTAAATCTAGTGTAACGATTTCTGAATCAGGAGATGATGTTGTTAATGAGAAATTAGAGGAGCCAGTGAGTATGAATGAGACTGCCAATGGTACAGGTGCAGGCAAGGAAGGTGAGGATGATCGTTATACTCATCGAGTTACGGAGTCTAATAGGGAGGTTCTTGATGAAAATGAAGTGAAGAAAGAAACAGTGAATTTGGACTGTGATGAAGAAACAACTGGGGAGTTACAAAATACTAACGGTGGCCATCAGGTAGAGATTCTAGACAATCAAAGGGAAAAACCAAATGATGACTGTAACCTTATCAATGCTGATGCAAAATTCGCTGATAAGGAAAGTGGTAAACTTGCAGATTCTACTGCCAGTTCTGAATCGAGGTCTGAAAATGTGGAAGTTGATGATTTGAGTTATTCTTCAGCTCAAAAAGAACATATGGCTTACAATGTCAAGCAAGTGAATAATGCTTCAGTTGCAGTGGATTCAGGTGATAATGGAGACACATCAGATGCTTCAACAGTGAATTTAGAACGTAATTGGCTAACAACGTCGGAAGTGAAATATAATTCAGCTGATCTGCCTAAAACAGTTGATATAACGGAGGTGGAGGTCCAAAATGGAACACTGTCTCCTGCTAATGTAAATAATGAAAAGACAGTGAAGATTCAGGATGTTAAAACTGGTTTGACAGCAACAGATAACCACATTGATAAAAGTCAGCAACTTGATGATTACGACAAAAGTAGTATTAGTGTTGAGAAACTTGAGAAGGCAGAGGGAAAGGTTCAAGAAGAAAATCAGGGCACTCTCCCAAATACAGGTGTAGGTGTACAACCTTCGCCCAATTTACCTTTGTCATCTAAAAAAGTTTCAAATCCTGCTCCTTCTCCTGCTCGTCCTGCTGGTCTTGGGCGTGCTGCTCCATTATTAGAGCCTGCTCTGCGGATGGCACAACAGCCCCGTGTAAATGGTAATTCTTCACATATGCAGTCTCAACAAGTTGAGGACTCTTCAAATGGAGAGGCTGAGGAGAATGATGAGACTCGTGAAAAACTACAAATGATCAGGGTGAAGTTTCTGCGTCTTGCTCATAGGCTTGGTCAGACTCCACATAACGTTGTTGTAGCTCAGGTTTTGTATCGTCTTGGATTAGCTGAGCAGCTGCGAGGAAGAAGTGGAGGCCGGGTCGGTGCCTTCAGTTTTGATCGTGCTAGTGCCATGGCAGAGCAGCTCGAGGCAGCTGGGCAAGAGCCACTTGATTTTTCTTGTACAATTATGGTTTTGGGAAAGACGGGCGTTGGTAAAAGTGCAACAATTAATTCTATATTCGATGAAGTTAAGTTTGGCACAGATGCTTTTCAAATTGGTACAAAGAAAGTTCAGGATGTTGTGGGTACTGTGCAGGGTATTAAGGTGCGTGTCATTGACACACCAGGCCTTCTGTCCTCGTGGTCAGATCAGCGCCAGAATGAAAAGATTCTCCTTTCTGTTAAGCGCCTTATCAAGAAAACACCTCCAGATATTGTATTGTATCTAGACAGGTTGGACGTGCAGAACAGGGATTTTAGTGACATGCCACTCTTGCGGACTATCACTGACATATTTGGCCAGTCCATTTGGTTTAATGCAATTGTGGTATTCACTCATGCAGCATCAGCTCCTCCTGACGGCCCTAATGGTGCTGCTTCTAGCTATGACATGTTTGTTACTCAACGCTCTCATGTTGTCCAGCAAGCCATTCGTCAGGCAGCTGGTGATATGCGGCTCATGAATCCTGTGTCCCTCGTGGAGAACCACTCCGCATGCAGAACAAACAGAGCTGGACAAAGAGTTTTGCCAAACGGTCAGGTATGGAAGCCTCATTTGTTACTTCTGTCATTTGCATCAAAGATCCTGGCTGAAGCAAATGCACTGTTGAAGCTTCAAGACAGTCCTCCTGGAAGGCCTTTCACAGCTCGATCAAGGGCTCCTCCCTTACCTTTTCTCCTCTCATCCCTTCTTCAATCGAGACCACAGGTTAATCTGCCTGAGGAACAGTTTGCTGATGGGGATGATATTGAAGATGAATTGGACGAATCTTCTGATTCTGAAGAAGAATCAGAATACGATGAGTTGCCACCATTTAAACGATTGACGAAGGCTCAAGTCTCAAAACTCTCCAAGGTACAGAAGAAGGCATATTTTGACGAATTAGAATATAGGGAGAAACTGTTTATGAAGAAACAACTAAAAGAAGAGAAAAGGAAGCGAAAAATGATGAAGAAGATGGCAGCTCAGATTAGGGATCTGCCAAGTGACTACACTGAGAACGTAGAAGAAGAAAGTAATGGTGCAGCATCAGTGCCAGTTCCCATGCCAGATTTGCCATTACCTGCTTCATTTGATTCTGATAATCCTACTCATCGGTATCGATATCTTGATTCGTCCAACCAATGGTTAATAAGGCCTGTACTGGAAACACATGGTTGGGACCATGATGTTGGTTATGAAGGTATAAATGTAGAAAAACTGTTTGTTGTCAAAGAGAGAATTCCCTTATCCTTTTCGGGTCAGGTTACCAAGGATAAGAAGGACGCCAACCTTCAGATGGAAGTGACAAGTTCAATAAAGCATGGAGAAGGAAAAGCAACTTCTTTTGGTTTTGATATGCAAACTGTTGGGAAGGACTTGGCTTACACTCTTCGTGGTGAGAGGATATTTTGTAATTTTTGGAAAAATAAGGCTATTGCTGGTATTTCAGCCACTCTTTTAGGTGATACTTTGTCTGGTGGAGTGAAAGTAGAAGACAAATTGATTGCCAGTAAACGATTCAGGTTGGTTATAGCCGGAGGTGCAATGACCAGTCGAGGAGATGTTGCTTATGGAGGCAGTCTGGAGGCTCAATTAAGGGACAAAGAGTATCCTTTGGGTCGATCGCTATCAACTCTTGGGCTATCAGTTATGGATTGGCATGGAGATCTTGCCATTGGATGCAATTTGCAGTCTCAAATTCCCATAGGACGATCAACAACTCTGATAGGTAGAGCCAACTTGAATAATAGGGGGGCAGGGCAAGTAAGCATTCGCTTAAACAGCTCTGAACAGCTTCAAATAGCATTACTCGGCCTTGTTCCTCTCATGAAGAAGATTTTTGGTTATCATCAGCAGTTGTAG 3732 42.79 LCLSRKLEAKVEDFVMDIGADIVDGLHTGGTKSLGTSDERVEERGVFEDTMNAEEDFLEQRMNSDSADAAVNEEGEEQSAGMVYEDPNSVYEVDKFEEATDGLSLTSQNWEEVNDEGKPSLITTKEEVYDDGASVLEPIATCVVDEEGSEVKVKSAFNELPNGLSSHEEGGKEFSQVGARNEGEILDEDETDDVKSSVTISESGDDVVNEKLEEPVSMNETANGTGAGKEGEDDRYTHRVTESNREVLDENEVKKETVNLDCDEETTGELQNTNGGHQVEILDNQREKPNDDCNLINADAKFADKESGKLADSTASSESRSENVEVDDLSYSSAQKEHMAYNVKQVNNASVAVDSGDNGDTSDASTVNLERNWLTTSEVKYNSADLPKTVDITEVEVQNGTLSPANVNNEKTVKIQDVKTGLTATDNHIDKSQQLDDYDKSSISVEKLEKAEGKVQEENQGTLPNTGVGVQPSPNLPLSSKKVSNPAPSPARPAGLGRAAPLLEPALRMAQQPRVNGNSSHMQSQQVEDSSNGEAEENDETREKLQMIRVKFLRLAHRLGQTPHNVVVAQVLYRLGLAEQLRGRSGGRVGAFSFDRASAMAEQLEAAGQEPLDFSCTIMVLGKTGVGKSATINSIFDEVKFGTDAFQIGTKKVQDVVGTVQGIKVRVIDTPGLLSSWSDQRQNEKILLSVKRLIKKTPPDIVLYLDRLDVQNRDFSDMPLLRTITDIFGQSIWFNAIVVFTHAASAPPDGPNGAASSYDMFVTQRSHVVQQAIRQAAGDMRLMNPVSLVENHSACRTNRAGQRVLPNGQVWKPHLLLLSFASKILAEANALLKLQDSPPGRPFTARSRAPPLPFLLSSLLQSRPQVNLPEEQFADGDDIEDELDESSDSEEESEYDELPPFKRLTKAQVSKLSKVQKKAYFDELEYREKLFMKKQLKEEKRKRKMMKKMAAQIRDLPSDYTENVEEESNGAASVPVPMPDLPLPASFDSDNPTHRYRYLDSSNQWLIRPVLETHGWDHDVGYEGINVEKLFVVKERIPLSFSGQVTKDKKDANLQMEVTSSIKHGEGKATSFGFDMQTVGKDLAYTLRGERIFCNFWKNKAIAGISATLLGDTLSGGVKVEDKLIASKRFRLVIAGGAMTSRGDVAYGGSLEAQLRDKEYPLGRSLSTLGLSVMDWHGDLAIGCNLQSQIPIGRSTTLIGRANLNNRGAGQVSIRLNSSEQLQIALLGLVPLMKKIFGYHQQL 1243
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 18328173 18331904 + Bpe001748.1 Bpe15g00822 116501

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g00822 1243 Pfam AIG1 family 616 749 IPR006703 GO:0005525
Bpe15g00822 1243 MobiDBLite consensus disorder prediction 458 486 - -
Bpe15g00822 1243 PANTHER TRANSLOCASE OF CHLOROPLAST 120, CHLOROPLASTIC-LIKE 477 1241 - -
Bpe15g00822 1243 MobiDBLite consensus disorder prediction 63 83 - -
Bpe15g00822 1243 MobiDBLite consensus disorder prediction 305 326 - -
Bpe15g00822 1243 MobiDBLite consensus disorder prediction 449 497 - -
Bpe15g00822 1243 MobiDBLite consensus disorder prediction 870 900 - -
Bpe15g00822 1243 MobiDBLite consensus disorder prediction 873 895 - -
Bpe15g00822 1243 MobiDBLite consensus disorder prediction 310 326 - -
Bpe15g00822 1243 ProSiteProfiles AIG1-type G domain profile. 613 842 IPR006703 GO:0005525
Bpe15g00822 1243 CDD Toc34_like 585 833 - -
Bpe15g00822 1243 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 609 750 IPR027417 -
Bpe15g00822 1243 Pfam Translocase of chloroplast 159/132, membrane anchor domain 974 1237 IPR024283 -
Bpe15g00822 1243 Gene3D - 588 833 IPR027417 -
Bpe15g00822 1243 TIGRFAM 3a0901s04IAP86: chloroplast protein import component Toc86/159, G and M domains 492 1239 IPR005690 GO:0003924|GO:0005525|GO:0009707|GO:0045036
Bpe15g00822 1243 PANTHER GTPASE, IMAP FAMILY MEMBER-RELATED 477 1241 IPR045058 -
Bpe15g00822 1243 MobiDBLite consensus disorder prediction 512 531 - -
Bpe15g00822 1243 MobiDBLite consensus disorder prediction 512 541 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g00822 - - - cmo:103490300 1313.13
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bpe12g00112 Bpe15g00822 CCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe13g01147 Bpe-Chr13:16945398 Bpe15g00822 Bpe-Chr15:18328173 2.17E-166 dispersed
Bpe03g00212 Bpe-Chr3:2607965 Bpe15g00822 Bpe-Chr15:18328173 2.87E-06 transposed
Bpe12g00112 Bpe-Chr12:805137 Bpe15g00822 Bpe-Chr15:18328173 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g129 . . . . . Bpe12g00112 . . Cmo19g00737 . . . . . Sed08g0469 . Cpe15g00583 Bhi05g01734 Tan02g0702 Cmetu06g1183 . Hepe02g0438 . . Cla02g00439 Cam02g0448 Cec02g0446 Cco02g0466 Clacu02g0450 Cmu02g0444 Cre02g0778 Cone2ag0203 Cone16ag0840 . . . Csa07g00087 . Cme01g01277 Blo04g00558 Blo13g00521 . Bda14g00607 Bpe15g00822 . Bma03g00599 Bma08g00616 . . . Cma11g01385 Cma19g00728 . Car19g00558 . . . . . . . . . . . . . . . . Lsi11g01187 . Chy01g00691 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005811 1 1 2 2 2 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 1 2 1 39
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe15g00822 Bpe_Chr15 FPKM 6.599709 7.483568 6.522651 7.828856 10.677653 11.874912 9.985304 7.96739 7.779986 8.296778