Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bpe15g00825 | ATGGCGGCAAAAGTGTCTCCTTGGGGAAAGCCCGGAGCTTGGGCTCTCGATTCTGAAGAACACGAAGCCGAACTTCTTGCAGGGCATCCATCTGACCAGAACACCCAACCGACCGCTGATTTTCCTTCTCTGGCTGCTGCCGCCGCTACCAAACCAAAGAAGAAGAAAGGCCAGACCATCTCCTTAGCCGAGTTTACTACCTATGGAGGTGCCAAACCTCCTGCTGTTTCCAACCAACCTACGGGTCTCACCCACGAAGATATCCTGATTCTCCCCACCGGTCCACGCGAGCGAACTGCTGAGGAGCTGGACCGGACTCGGCTTGGTGGAGGATTCAGGAATTACGGCTCGAATGGTTCTTATGATCGGAGTAATAGACACTCCAGTGGAGATGATTCATCTAATTCGAGGTGGGGTTCGTCTAGGGTTTCTGATGAGACGAAGAGGAGCGGTGGTTTTGGAAAGGAGTATGTGAGGGACGCGGCTCCATCAAGGGCGGATGAGATTGATAACTGGGCGGCAGGCAAAAAGCCTATTGTGAGCGACGGATTTGAGAAGAGGGATAGAGGATGGTTTTCGGATTCTCGGTCCTCTAAAGCAGACGATTCAGATAGTTGGGTTTCCAATAAGACCTTTGTACCTTCCGAAACTCGGAGATTCAGTAGTAATGGGAGTTTTGATAGAGAACGGAGAGGGGGGTTCACCTCGAATGGTATTGGTGTTGATTCAGATAAGTGGGGGAAGAAGGAGGAGGGTATTAATAGAAGCATAGGTGAGAGGCCAAGGCTTAATTTGCAGCCTCGTACTGTCCCGATAAGCAATGATAGGAAGCCGGAGGCGCCAGAGATTCTTGCAAAGCCTAAGGGTTCAAATCCTTTTGGAGAGGCAAGACCGAGGGAGGAGATTTTGGCTGAAAAGGGACAAGATTGGAAGAAGATCGATGAGAAACTTGAGTTGATGAAAAATAAGATTAAGGATGAGGAGAATGTGGAAAAGCCTGATGGAAATTCTCATGGGAAAAGAAGCTTTGGAATTGGGAATGGCAGGGTTTCTGAAGATCGGGCTGAGAGGTCCTGGAGAAAGCCTGATTCGGTAGAGACTCATCCCGAAAGGTAG | 1116 | 49.73 | MAAKVSPWGKPGAWALDSEEHEAELLAGHPSDQNTQPTADFPSLAAAAATKPKKKKGQTISLAEFTTYGGAKPPAVSNQPTGLTHEDILILPTGPRERTAEELDRTRLGGGFRNYGSNGSYDRSNRHSSGDDSSNSRWGSSRVSDETKRSGGFGKEYVRDAAPSRADEIDNWAAGKKPIVSDGFEKRDRGWFSDSRSSKADDSDSWVSNKTFVPSETRRFSSNGSFDRERRGGFTSNGIGVDSDKWGKKEEGINRSIGERPRLNLQPRTVPISNDRKPEAPEILAKPKGSNPFGEARPREEILAEKGQDWKKIDEKLELMKNKIKDEENVEKPDGNSHGKRSFGIGNGRVSEDRAERSWRKPDSVETHPER | 371 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 15 | 18337642 | 18338757 | - | Bpe001750.1 | Bpe15g00825 | 116504 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bpe15g00825 | 371 | MobiDBLite | consensus disorder prediction | 68 | 302 | - | - | |
| Bpe15g00825 | 371 | MobiDBLite | consensus disorder prediction | 323 | 371 | - | - | |
| Bpe15g00825 | 371 | MobiDBLite | consensus disorder prediction | 323 | 338 | - | - | |
| Bpe15g00825 | 371 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4B | 1 | 365 | IPR010433 | GO:0003743 | |
| Bpe15g00825 | 371 | Pfam | Plant specific eukaryotic initiation factor 4B | 7 | 346 | IPR010433 | GO:0003743 | |
| Bpe15g00825 | 371 | MobiDBLite | consensus disorder prediction | 142 | 172 | - | - | |
| Bpe15g00825 | 371 | MobiDBLite | consensus disorder prediction | 350 | 371 | - | - | |
| Bpe15g00825 | 371 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4B3 | 1 | 365 | - | - | |
| Bpe15g00825 | 371 | MobiDBLite | consensus disorder prediction | 243 | 257 | - | - | |
| Bpe15g00825 | 371 | MobiDBLite | consensus disorder prediction | 180 | 203 | - | - | |
| Bpe15g00825 | 371 | MobiDBLite | consensus disorder prediction | 204 | 221 | - | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Bpe12g00111 | Bpe15g00825 | CCT |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bpe10g00801 | Bpe-Chr10:14145213 | Bpe15g00825 | Bpe-Chr15:18337642 | 9.61E-38 | transposed | |
| Bpe12g00111 | Bpe-Chr12:798647 | Bpe15g00825 | Bpe-Chr15:18337642 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bpe15g00825 | - | - | zju:107427556 | 444.121 |