Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g00849 ATGAAGATCCGATGCGACGTTTGTGAGAAAGCGGAGGCCTCAGTCTTCTGCACAGCCGATGAAGCCGCTCTCTGCAATGGCTGCGATCGCCATGTCCACCATGCAAACAAGCTCGCCAGCCAGCACAAGCGTTTCTCTCTCCTCCACCCCACCTTCAAACAATCCCCTGTCTGCGACATCTGTCAGGAAAAGAGAGCTTTTGTTTTCTGTAAGGAAGACAGATCAGTTCTTTGCAGAGAATGCGATGTTTCAACCCACAAAGCCAACGAACACACCAAAAAGCACAATAGATTTCTTCTTACGGGAGTAAAGCTTTCTTCCTCATCTTCTTTCTACCCAACAACGTCAACCTGTTATCCGGCCATTGATGCTGAAACTGGAAGCTTCGAAACACAAGCTAAACGGCCGAAAACAAACTTCAGCGAAAGTCATAATGCTGGGCCAGTTGGCGAGGGTTGCTCGTATTCAGCAAGCAGCATATCGGAGTATTTGACGGAGACGTTGCCCGGATGGTGCGTCGAGGATCTCCTTGATCCCTCAAGCTTTGCCAATGGCTTCTGTAAGGTTTGCAGCACATCCAAGTTTATTTTTTATTTTTTTGTAGAGAGAGAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTTTTGCTGATTGA 657 47.79 MKIRCDVCEKAEASVFCTADEAALCNGCDRHVHHANKLASQHKRFSLLHPTFKQSPVCDICQEKRAFVFCKEDRSVLCRECDVSTHKANEHTKKHNRFLLTGVKLSSSSSFYPTTSTCYPAIDAETGSFETQAKRPKTNFSESHNAGPVGEGCSYSASSISEYLTETLPGWCVEDLLDPSSFANGFCKVCSTSKFIFYFFVEREGERERERERESFAD 218
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 18497243 18498000 - Bpe001773.1 Bpe15g00849 116528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g00849 218 PANTHER B-BOX ZINC FINGER PROTEIN 20 1 193 - -
Bpe15g00849 218 CDD Bbox1_BBX-like 57 100 - -
Bpe15g00849 218 Gene3D Classic Zinc Finger 1 96 - -
Bpe15g00849 218 SMART bboxneu5 4 47 IPR000315 GO:0008270
Bpe15g00849 218 SMART bboxneu5 53 100 IPR000315 GO:0008270
Bpe15g00849 218 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 193 - -
Bpe15g00849 218 CDD Bbox1_BBX-like 5 47 - -
Bpe15g00849 218 ProSiteProfiles Zinc finger B-box type profile. 53 100 IPR000315 GO:0008270
Bpe15g00849 218 Pfam B-box zinc finger 54 93 IPR000315 GO:0008270
Bpe15g00849 218 Pfam B-box zinc finger 3 44 IPR000315 GO:0008270
Bpe15g00849 218 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe05g00323 Bpe15g00849 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g00449 Bpe-Chr7:6308688 Bpe15g00849 Bpe-Chr15:18497243 1.17E-83 dispersed
Bpe09g00270 Bpe-Chr9:2009553 Bpe15g00849 Bpe-Chr15:18497243 2.95E-37 dispersed
Bpe15g00849 Bpe-Chr15:18497243 Bpe02g00365 Bpe-Chr2:2405816 2.86E-60 wgd
Bpe15g00849 Bpe-Chr15:18497243 Bpe02g01717 Bpe-Chr2:19653960 2.43E-63 wgd
Bpe15g00849 Bpe-Chr15:18497243 Bpe05g00323 Bpe-Chr5:16885232 7.61E-85 wgd
Bpe15g00849 Bpe-Chr15:18497243 Bpe05g00126 Bpe-Chr5:2779190 2.94E-62 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22625 PF00643 zf-B_box 6.90E-08 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g00849 - - mnt:21391799 251.906