Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g00852 GGACCTTCGTCACACGATGATTTCCTCTCCAGTCCGATAGGGAATACGTTATCGTCTCCGAGGAGTGTTTCTCGTCGAAGAAGGAGGCGTCCTCCGTCTACTCCGCTGGAATCTGCCACTCCAACTCCTCAATCTCCATTTGCAACATTGGAAACAACACCGACAGCGGCTGCATCACGTGGTCAACGGAGAGCTGGGGATCGAAGGTCCTCTGGAACGACGCCTATGGCGGCCACTCCTACTGATGACGCTCCACTTTCATCCGAAGGTGGCGAGGGCTACGACATGGATGAGGACCACCCCACATTTGTTTGGGGGACGAATATAAGCGTCGATGATGTTAAAGGGGCGATTATTCGTTTCTTGAAACATTTCCGGGATTCCAGAGCTTCACAATCGGAAGGAGAATTTATTACTGAAGGGAAGTATACGGAGGCAATCAAACGGGTTCTTGAGATTGAAGGCGATTCCCTGGATGTTGATGCCCGTGATGTGTTTGACTATGATTCCGATTTGTATACTAAGATGGTGAGGTACCCCCTTGAAGTTCTGGCAATTTTTGATATTGTTTTGATGGAAATGGTCCCACAAATTAACCCTCTGTTTGAGAAGCACATTCAAACACGGATTTACAATCTCAAAACATCTACTTCAATGAGAAATCTCAATCCATCCGACATTGAGAGGATGGTATCACTGAAAGGAATGATTATTCGGTGTAGTTCCATAATACCTGAGATTAGAGAAGGGGTGTTTAGGTGTCTTCTCTGTGGATACTACTCGGACCCCATTGCAATAGAGAGAGGACGAATCACTGAGCCAACTATTTGCTTGAAAGAAGAGTGCCAAGCAAAAAATTCCATGACTCTAGTTCACAATAGATGCAGATTCGCTGACAAGCAGATTGTGAGGCTTCAGGAGACTCCTGATGAGATTCCAGATGGGGGCACACCACACACTGTGAGCTTGTTGATGCATGACAAGCTGGTTGATTCTGTAAAGCCAGGTGACAGAGTTGAGGTTACTGGGATTTACCGGGCAATGACTGTGAGAGTTGGACCTACACAGAGAACTACATATATAGATTGTCTTCACGTAAAGAAGACTGATAAGTCAAGAATGCAAGTGGAGGATCTTATGGAAGTAGAAAATCAATTGGGCTCAAATTTGGATGCTCTCTCTTTTGATGAAGCGACTGTGGAGAAGTTGAAAGATCTATCAAAATTACCTGACATATACAATAGACTAACCAGATCGTTGGCACCAAACATTTGGGAGCTAGATGATGTTAAGAAAGGTCTCCTTTGCCAGCTTTTTGGTGGCAATGCTTTAAAGTTACCATCTGGTGCTAGTTTCCGAGGTGATATAAACGTACTTCTTGTTGGTGATCCTGGAACTAGCAAGTCTCAGCTACTCCAATACATACACAAGCTGTCTCCTCGAGGTATTTACACAAGTGGAAGGGGGAGTTCTGCTGTTGGTTTGACCGCTTATGTTGCTAAAGATCCAGAAACAGGGGAAACAGTTCTGGAGAGTGGAGCATTGGTCTTGAGTGACAGAGGCATCTGCTGTATTGACGAATTTGATAAAATGTCTGATAATGCAAGGAGCATGTTACATGAAGTTATGGAACAGCAAACTGTTTCTGTAGCCAAGGCAGGAATCATTGCCTCTCTAAATGCAAGGACCTCAGTGTTGGCTTGTGCAAATCCAAGTGGTTCACGTTACAATCCTCGTTTGTCTGTGATTGACAACATACACCTTCCTCCAACTTTATTTCTGTGGTTTTCTCACAGGTTTGACTTGATTTACTTAATTCTTGACAAAGCTGATGAGGATACAGATAGGCGCCTTGCGAAGCATATTGTTTCGTTACACTTTGAGAATCCCGAGATTTCAGAGCAAGATTTCTTGGATCTTCATACACTAACCGCATATGTGAGTTACGCTCGAAAGCATGTTCAGCCACAATTATCAGATGAGGCTGCCGAAGAATTAACTCGAGGTTATGTAGAGTTGAGGAGGAGAGGAAATTTCCCAGGCAGTAGTAAAAAGGTTATAACAGCTACTCCCAGGCAGATTGAAAGTTTAATACGCCTTAGTGAAGCCCTAGCTCGGATTCGTTTGTCGGAGTGGGTTGAAAAACACGATGTAGTTGAGGCATTTCGACTTCTTGAAGTTGCAATGCAACAATCAGCAACAGATCACTCGACTGGAACAATTGATATGGATCTAATAACAACTGGAATTTCAGCTAGTGAAAGAATGAAACGAGAAAGTGTGCTCTCAGCAATCCGCAATATTATTAGGGAGAAGATGCAGCTTGGCGGCCCCCCCATGCGATTACCGGAGTTGCTAGAGGAGCTAAAGAAGCAGAGCTCAAGTGGTGAAGTCCACCTCAATGCTCTGAGGACTGCGGTGGCAACTCTAGCAAGCGAGGGATTTGTAGGAATCCAAGGTGATACCATAAAAAGGATACTCAATTCAGAGAAGAGTCCATTTCAGCGAACTTATGCTGCTCAGAGAAATTCTTTCCTTAATTTCTTCATTTTTTATTTGTGTTCACTTAAGATTAAGAAGTGTGGAGAGATGGCGCGGAAATTACGTTTTTTCAAGGAGCAGATGTCAAAGGCTGGATTAGTTTCAAAAGGGTTTATAACAAAAGCTGATATCAATGTGGATGACCTAGAGGTCAAACTTGGTGAACTTGAGGCAGAATTGGCTGAAATAAATGCAAATGGCGAGAAGTTACAGCGTTCATACAGTGAACTTATAGAATACAAATTTGTTCTGCAGAAGGCTGGTGAGTTTTTTCAGTTAGCACAAAGCAGTGCCTTGGAACAACAGAGAGAATATGAATCACGTCAAGTGGGTGAAGAATCCTTAGACACGCCATTATTGTTGGAACAAGATATGTCAGCTGATGCTTCAAAGCAAATCAAGTTGGGGTTTCTTGCTGGAGTTATGCCTAGGGAGAAATCTGTGGCTTTTGAGAGGATTTTGTTTCGTGCTACCCGGGGAAATGTATTTCTAAAGCAGGCTGGTGTTGAAGAACCTGTAATAGATCCTGCTTCTGGAGACAAGATTGAGAAAAATGTGTTCTTGATTTTCTACTCCGGAGAAAGAGCAAAAAACAAAATTCTTAAAATATGTGAGGCATTTGGAGCCAATCGATATCCATTTTCGGAAGAAGTGGACAAACAAGCTCAAATGGTCACCCAGGTTTCAGGAAGGATCTCCGAACTGAAAACAACCATAGATGTTGGACTGCTGCATCGAGGAAATTTGTTGCTAGCCATCGGTGATCAAATTGAGCAATGGGACATTTTGGTGAGAAAGGAGAAGTCAATATACCATACATTGAACATGCTTAGCCTTGATGTGACAAAAAAGTGTTTAGTGGCTGAGGGATGGTCTCCAGTTTTTGCAACAAAACAGATCCAGGATGCATTGCAACGAGCAGCATTTGATTCTAATTCCCAAGTTGGGGCCATATTCCAGGTTCTGCAAACAAGAGAGTCTCCACCTACTTATTTCCGGACTAATAAATTCACTTCTTCATTTCAAGAAATTGTTGATGCATATGGTGTGGCTAAGTATCAAGAAACCAATCCTGGTGTATATACTGTTGTCACCTTCCCGTTTCTCTTTGCTGTTATGTTTGGTGACTGGGGACATGGAATATGTTTGTTACTGGCAGCAATGTATTTTATTATCAGGGAAAGGAAATTTTCCAATCAGAAGCTTGGTGACATCATGGAAATGACCTTTGGAGGGCGCTATGTTATTATGATGATGGCACTCTTCTCAATATATACAGGTCTAATCTATAATGAGTTCTTCTCTGTCCCATTTGAACTTTTTGGTCGCTCAGCTTATGCTTGTCGTGACCTCGACTGCAGAGACGCAACAACAATTGGATTGATAAAGGTGCGGCCCACCTACCCATTCGGTGTAGACCCTGTATGGCATGGTACTCGAAGTGAGCTGCCATTCCTCAACTCTTTGAAAATGAAAATGTCAATCCTTCTCGGGGTTGCCCAAATGAACCTTGGAATCATACTAAGCTATTTCAATGCAAAATTTTTCAGAAACGGCCTTAATATCTGGTACCAGTTTTTGCCACAGATGATATTTTTGAACTCTCTTTTTGGATACCTATCTCTCCTCATAATTTTAAAATGGTCCACTGGTTCACAAGCAGATTTGTACCATATTGTGCTTCTTTTACTGGCACTTGTAGCTGTACCATGGATGCTGCTTCCAAAACCTCTTATATTGAAGAAGCAACACCAGGAGAGGCATCACGGTGAATCTTATGAGCCATTACAGAGCGAAGACTTACTTCAATTAGAATCAAATCATAATGCTCATGGTCATGAAGAATTTGAGTTCAGTGAAGTTTTTGTGCATCAACTTATACACACAATAGAATTTGTACTTGGAGCAGTGTCAAATACCGCTTCCTACCTTCGTCTTTGGGCCCTAAGTCTTGCTCATTCAGAACTATCGAGTGTATTCTATGAGAAGGTTCTTCTTCTAGCTTGGGGGTTCAACAATGTAATCATCCTCGTAGTAGGCATCATTGTCTTTGTATGTGCCACCGTTGGCGTGTTACTAGTGATGGAAACCCTCAGTGCTTTTCTTCACGCTCTGCGTCTTCATTGGGTGGAATTCCAAAACAAATTTTACGAGGGAGATGGCTACAAATTCTATCCATTTTCATTTTCTTTGCCGGACGATGAAGCTGATTGA 4755 42.54 GPSSHDDFLSSPIGNTLSSPRSVSRRRRRRPPSTPLESATPTPQSPFATLETTPTAAASRGQRRAGDRRSSGTTPMAATPTDDAPLSSEGGEGYDMDEDHPTFVWGTNISVDDVKGAIIRFLKHFRDSRASQSEGEFITEGKYTEAIKRVLEIEGDSLDVDARDVFDYDSDLYTKMVRYPLEVLAIFDIVLMEMVPQINPLFEKHIQTRIYNLKTSTSMRNLNPSDIERMVSLKGMIIRCSSIIPEIREGVFRCLLCGYYSDPIAIERGRITEPTICLKEECQAKNSMTLVHNRCRFADKQIVRLQETPDEIPDGGTPHTVSLLMHDKLVDSVKPGDRVEVTGIYRAMTVRVGPTQRTTYIDCLHVKKTDKSRMQVEDLMEVENQLGSNLDALSFDEATVEKLKDLSKLPDIYNRLTRSLAPNIWELDDVKKGLLCQLFGGNALKLPSGASFRGDINVLLVGDPGTSKSQLLQYIHKLSPRGIYTSGRGSSAVGLTAYVAKDPETGETVLESGALVLSDRGICCIDEFDKMSDNARSMLHEVMEQQTVSVAKAGIIASLNARTSVLACANPSGSRYNPRLSVIDNIHLPPTLFLWFSHRFDLIYLILDKADEDTDRRLAKHIVSLHFENPEISEQDFLDLHTLTAYVSYARKHVQPQLSDEAAEELTRGYVELRRRGNFPGSSKKVITATPRQIESLIRLSEALARIRLSEWVEKHDVVEAFRLLEVAMQQSATDHSTGTIDMDLITTGISASERMKRESVLSAIRNIIREKMQLGGPPMRLPELLEELKKQSSSGEVHLNALRTAVATLASEGFVGIQGDTIKRILNSEKSPFQRTYAAQRNSFLNFFIFYLCSLKIKKCGEMARKLRFFKEQMSKAGLVSKGFITKADINVDDLEVKLGELEAELAEINANGEKLQRSYSELIEYKFVLQKAGEFFQLAQSSALEQQREYESRQVGEESLDTPLLLEQDMSADASKQIKLGFLAGVMPREKSVAFERILFRATRGNVFLKQAGVEEPVIDPASGDKIEKNVFLIFYSGERAKNKILKICEAFGANRYPFSEEVDKQAQMVTQVSGRISELKTTIDVGLLHRGNLLLAIGDQIEQWDILVRKEKSIYHTLNMLSLDVTKKCLVAEGWSPVFATKQIQDALQRAAFDSNSQVGAIFQVLQTRESPPTYFRTNKFTSSFQEIVDAYGVAKYQETNPGVYTVVTFPFLFAVMFGDWGHGICLLLAAMYFIIRERKFSNQKLGDIMEMTFGGRYVIMMMALFSIYTGLIYNEFFSVPFELFGRSAYACRDLDCRDATTIGLIKVRPTYPFGVDPVWHGTRSELPFLNSLKMKMSILLGVAQMNLGIILSYFNAKFFRNGLNIWYQFLPQMIFLNSLFGYLSLLIILKWSTGSQADLYHIVLLLLALVAVPWMLLPKPLILKKQHQERHHGESYEPLQSEDLLQLESNHNAHGHEEFEFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYEKVLLLAWGFNNVIILVVGIIVFVCATVGVLLVMETLSAFLHALRLHWVEFQNKFYEGDGYKFYPFSFSLPDDEAD 1584
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 18514200 18534212 + Bpe001776.1 Bpe15g00852 116531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g00852 1584 SUPERFAMILY Nucleic acid-binding proteins 137 361 IPR012340 -
Bpe15g00852 1584 Pfam MCM N-terminal domain 117 215 IPR027925 -
Bpe15g00852 1584 PRINTS Mini-chromosome maintenance (MCM) protein family signature 453 468 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bpe15g00852 1584 PRINTS Mini-chromosome maintenance (MCM) protein family signature 513 527 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bpe15g00852 1584 PRINTS Mini-chromosome maintenance (MCM) protein family signature 565 577 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bpe15g00852 1584 PRINTS Mini-chromosome maintenance (MCM) protein family signature 541 554 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bpe15g00852 1584 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 730 739 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Bpe15g00852 1584 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 292 304 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Bpe15g00852 1584 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 241 254 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Bpe15g00852 1584 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 574 591 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Bpe15g00852 1584 PRINTS Mini-chromosome maintenance (MCM) protein 4 signature 428 439 IPR008047 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Bpe15g00852 1584 MobiDBLite consensus disorder prediction 40 59 - -
Bpe15g00852 1584 Gene3D - 108 213 - -
Bpe15g00852 1584 SMART AAA_5 454 607 IPR003593 -
Bpe15g00852 1584 SMART mcm 215 730 IPR031327 GO:0003677|GO:0005524|GO:0032508
Bpe15g00852 1584 Coils Coil 886 920 - -
Bpe15g00852 1584 MobiDBLite consensus disorder prediction 1 21 - -
Bpe15g00852 1584 PANTHER VACUOLAR PROTON ATPASES 825 1407 IPR002490 GO:0033179|GO:0046961|GO:1902600
Bpe15g00852 1584 PANTHER VACUOLAR PROTON ATPASES 1406 1582 IPR002490 GO:0033179|GO:0046961|GO:1902600
Bpe15g00852 1584 ProSitePatterns MCM family signature. 521 529 IPR018525 GO:0003677|GO:0005524|GO:0006260
Bpe15g00852 1584 Gene3D - 397 734 IPR027417 -
Bpe15g00852 1584 Gene3D - 246 298 - -
Bpe15g00852 1584 Pfam V-type ATPase 116kDa subunit family 857 1400 IPR002490 GO:0033179|GO:0046961|GO:1902600
Bpe15g00852 1584 Pfam V-type ATPase 116kDa subunit family 1405 1576 IPR002490 GO:0033179|GO:0046961|GO:1902600
Bpe15g00852 1584 MobiDBLite consensus disorder prediction 1 99 - -
Bpe15g00852 1584 CDD MCM4 415 728 - -
Bpe15g00852 1584 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 423 742 IPR027417 -
Bpe15g00852 1584 Pfam MCM AAA-lid domain 642 728 IPR041562 -
Bpe15g00852 1584 Pfam MCM OB domain 219 348 IPR033762 -
Bpe15g00852 1584 Pfam MCM P-loop domain 400 626 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bpe15g00852 1584 Gene3D - 735 816 IPR036388 -
Bpe15g00852 1584 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 825 1407 - -
Bpe15g00852 1584 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 1406 1582 - -
Bpe15g00852 1584 Gene3D - 219 359 IPR012340 -
Bpe15g00852 1584 ProSiteProfiles MCM family domain profile. 412 622 IPR001208 GO:0003677|GO:0005524|GO:0032508
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe12g00089 Bpe15g00852 CCT
Bpe12g00089 Bpe15g00852 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe15g00852 Bpe-Chr15:18514200 Bpe02g02150 Bpe-Chr2:22802576 9.09E-91 dispersed
Bpe01g00814 Bpe-Chr1:10377170 Bpe15g00852 Bpe-Chr15:18514200 9.28E-95 transposed
Bpe04g01592 Bpe-Chr4:22166731 Bpe15g00852 Bpe-Chr15:18514200 1.04E-08 transposed
Bpe08g00796 Bpe-Chr8:9861506 Bpe15g00852 Bpe-Chr15:18514200 8.77E-105 transposed
Bpe08g01190 Bpe-Chr8:13594349 Bpe15g00852 Bpe-Chr15:18514200 1.42E-97 transposed
Bpe10g00498 Bpe-Chr10:12199940 Bpe15g00852 Bpe-Chr15:18514200 3.97E-108 transposed
Bpe15g00015 Bpe-Chr15:1752229 Bpe15g00852 Bpe-Chr15:18514200 1.20E-58 transposed
Bpe12g00089 Bpe-Chr12:639661 Bpe15g00852 Bpe-Chr15:18514200 0 wgd
Bpe15g00852 Bpe-Chr15:18514200 Bpe05g00122 Bpe-Chr5:2534292 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g00852 K02212 - csv:101211850 1325.84