Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g00864 ATGAACAGAGCCTTGCCGGAGATGCTCCACTGCTTCACTGCCCCAGGAAATTGCGCCGACATGACCGTCTTGGAGAGGCAGACCGCCCGTCTCAAATGGCACCAAGACCAGCTTCACCACCACAACCTCCACAGCTACTTTCCCCAATCTTTTCCGGCGCCAATTCAGCCTGCTTATGTCCCTGACTCATTTATCGGCTCCCGGGAAACAGAGCTCGGAGAGGTTGTGCTTGGGTCGGTCAAGCCCGACCCAGGTTTGGAAAATGGGTGGCCGGAGTTGGGCAAGTTTGAGACTCCGACCATGGATTTTGGGTCTGGACTGGAACTCGATCCTTCCATTTCAAGAACTTCAGGCAGTCCACCAGGGATGATGGAAGCGAAGAACAGAGAATCTGTTCTGTCTCAGAAACTCAACTCTGCCATCGGAAGAGAAAGCTTTAAGAAAAGAAAGACGAACACTAAGATTGTTAACGAAGAAGACACGAAAGAAAAAAGGATCAAAGTATGTGCAGAAGAAGGAGACTCAAAGGTTATAGACCAAATCCAGACAAAAAACAACTCCACTGCCACGACAGCCAATAGAGAAACCTCCGCAGACACATCAAAGGAGAATTCAAAAGCTTCGGAAGTTCAAAAACCAGGTTACATTCACGTTCGAGCTCGTCGAGGCCAAGCCACAGACAGCCATAGCCTCGCTGAAAGAGCCAGAAGAGAAAAAATTAGCGAGAGAATGAAGTATCTGCAAGATTTAGTACCAGGATGTAATAAAATTACAGGAAAAGCTGGAATGCTAGACGAAATTATCAACTATGTTCAATCTCTGCAAAGACAAGTTGAGTTCTTGTCGATGAAATTAGCTGCTGTGAACCCTCGTCTTGAATTCAATGTGAACGTCGATGACATCTTTCCCGAAGAGGCACATCCTACATCCAATTTTCCACCAGTAGGAATACAGTCAGAGCTCAACAGCCCTGCCTATCTCCACTTTGATCAATCAAATCCAATGGCTTCATATTGTGGAATGGATCCATCCATCACGGGGCTTCGCCGGACAATCAGCGCTCCGGTTTCAATCTCGGAAAATTTTCTAGAGTCCTCCTGCTTTCCGCTCTCTTCAGCTTGGGAAGGAGATTTGCAGAGCCTGTATAATGTGGGATTTGATCAAGGAAGAACAGAAGACTTTCCATCTCATCCATATGCAGGTAGATAG 1209 46.9 MNRALPEMLHCFTAPGNCADMTVLERQTARLKWHQDQLHHHNLHSYFPQSFPAPIQPAYVPDSFIGSRETELGEVVLGSVKPDPGLENGWPELGKFETPTMDFGSGLELDPSISRTSGSPPGMMEAKNRESVLSQKLNSAIGRESFKKRKTNTKIVNEEDTKEKRIKVCAEEGDSKVIDQIQTKNNSTATTANRETSADTSKENSKASEVQKPGYIHVRARRGQATDSHSLAERARREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLEFNVNVDDIFPEEAHPTSNFPPVGIQSELNSPAYLHFDQSNPMASYCGMDPSITGLRRTISAPVSISENFLESSCFPLSSAWEGDLQSLYNVGFDQGRTEDFPSHPYAGR 402
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 18608878 18610545 - Bpe001787.1 Bpe15g00864 116543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g00864 402 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 222 293 IPR036638 GO:0046983
Bpe15g00864 402 CDD bHLH_AtBPE_like 214 297 - -
Bpe15g00864 402 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 224 274 IPR011598 GO:0046983
Bpe15g00864 402 PANTHER TRANSCRIPTION FACTOR BHLH63-LIKE 20 390 - -
Bpe15g00864 402 SMART finulus 230 280 IPR011598 GO:0046983
Bpe15g00864 402 MobiDBLite consensus disorder prediction 180 210 - -
Bpe15g00864 402 Pfam Helix-loop-helix DNA-binding domain 228 275 IPR011598 GO:0046983
Bpe15g00864 402 MobiDBLite consensus disorder prediction 180 198 - -
Bpe15g00864 402 Gene3D - 221 298 IPR036638 GO:0046983
Bpe15g00864 402 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 20 390 IPR024097 GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00557 Bpe-Chr4:3527339 Bpe15g00864 Bpe-Chr15:18608878 7.03E-38 dispersed
Bpe07g00427 Bpe-Chr7:4811294 Bpe15g00864 Bpe-Chr15:18608878 3.45E-135 dispersed
Bpe15g00864 Bpe-Chr15:18608878 Bpe05g00337 Bpe-Chr5:17247750 9.09E-137 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22628 PF00010 HLH 1.10E-06 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g00864 - - jre:109013802 459.144