Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g00885 ATGGGAGAGCTACTCGTCGATTCCGCTTTCATCCAACCCGAAGCCCATCGCCCGAAGCTCAATCCCATCCAGCACGTCGACGGAATCCCTCTCATTGACCTCTCCATCTCCGATTCCAATGGATTCGAGCAACTCGTGTCTCAGATCAGCTCCGCCTGTGAAAACTGGGGATTTTTCCAAGTAATAAATCACGGAGTACCGTCGGAGCTTCGTTCAAAAGTCGAGATCGTTGCGAGGCAATTTTTCTGCCAGGCGACGGAGGAGAAGAGGAAGGTGAAGCGGGACGAGGTTAATGCGATGGGGTACCACGACGGGGAGCATACGAAAAACGTGAGGGACTGGAAGGAGGTTTTTGATTTCTTGGTGGAGGATCCGACGCTGGTTCCGGCTTCTGTCGATGCTAACGACGAGGAATTAAGGACGCTGACTAATCAATGGCCTCAACATCCTCCTGAATTCAGACAGACATGCGAGGAATACGCAAAAGAGGTTGAAAAACTAGCACTCAGGCTATTAGAACTCCTTTCTCTTAGTTTGGGTTTGGCGGCTGAGAAATTGAAGGCCAATTTCAGAAATCAAACAAGCATGGCAAGGCTCAATTACTATCCCTCCTGCCCTTTCCCTCACTTAGCTCTCGGGGTCGGCCGGCACAAAGACGCCGGAGCATTGACCGTACTTGCGCAAGACGAAGTCGGGGGCTTGGAAGTAAAACGCAATTCCGATGAAGAATGGGTGGCCGTTGAACCGATCCAAGATGCATATATCATCAACATCGGTGATATTTTTCAGGTATGGAGCAACGACAGGTACGAGAGCGTGGAGCATAGAGTGAGGGTGAACAGGGAGAAGGCAAGGTTTTCGATGCCTTTCTTCTTAATGCCTCGCCACGATGTTATGGTGAAGCCATTGGAGGAGCTTCTGTGCGACGCCCAAAACCCTTCCAAGTACAAGGAGTACAATTGGGGCAAGTTCTTCGCTGCTCGGCACCGGAGTGATTTCAAGAAACAAGATGTCGAAAACATTCAAGTTCGTCATTTCAAGTTGCCGGAGCGAACCGATGGTGTTTTTAGCTCTAGTGAATAG 1083 50.05 MGELLVDSAFIQPEAHRPKLNPIQHVDGIPLIDLSISDSNGFEQLVSQISSACENWGFFQVINHGVPSELRSKVEIVARQFFCQATEEKRKVKRDEVNAMGYHDGEHTKNVRDWKEVFDFLVEDPTLVPASVDANDEELRTLTNQWPQHPPEFRQTCEEYAKEVEKLALRLLELLSLSLGLAAEKLKANFRNQTSMARLNYYPSCPFPHLALGVGRHKDAGALTVLAQDEVGGLEVKRNSDEEWVAVEPIQDAYIINIGDIFQVWSNDRYESVEHRVRVNREKARFSMPFFLMPRHDVMVKPLEELLCDAQNPSKYKEYNWGKFFAARHRSDFKKQDVENIQVRHFKLPERTDGVFSSSE 360
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 18788290 18789450 + Bpe001806.1 Bpe15g00885 116564

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g00885 360 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 193 294 IPR005123 -
Bpe15g00885 360 SUPERFAMILY Clavaminate synthase-like 7 332 - -
Bpe15g00885 360 PRINTS Isopenicillin N synthase signature 282 300 - -
Bpe15g00885 360 PRINTS Isopenicillin N synthase signature 49 66 - -
Bpe15g00885 360 PRINTS Isopenicillin N synthase signature 217 238 - -
Bpe15g00885 360 Gene3D - 2 335 IPR027443 -
Bpe15g00885 360 PANTHER OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN 6 341 - -
Bpe15g00885 360 Pfam 2OG-Fe(II) oxygenase superfamily 195 294 IPR044861 -
Bpe15g00885 360 Pfam non-haem dioxygenase in morphine synthesis N-terminal 29 148 IPR026992 -
Bpe15g00885 360 PANTHER FLAVANONE 3-DIOXYGENASE-RELATED 6 341 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g00885 - - - tcc:18607869 473.781
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe15g00885 Bpe-Chr15:18788290 Bpe02g00911 Bpe-Chr2:7578641 1.83E-57 dispersed
Bpe15g00885 Bpe-Chr15:18788290 Bpe04g00776 Bpe-Chr4:4987101 5.98E-59 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g494 . . . . . . . . . Cmo11g01335 . . . . . Cpe04g00259 . . . . . . . . Cla02g00570 Cam02g0600 Cec02g0600 Cco02g0611 Clacu02g0596 Cmu02g0594 . . . . . . . . Cme01g00017 . . . . Bpe15g00885 . . . . . . . . Car11g01076 . . . . . . . . . . . . . . . . . Lsi11g01040 . Chy01g00022 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000982 2 2 0 0 1 2 2 2 3 3 2 2 3 2 3 3 2 4 3 3 4 2 3 1 3 4 5 3 3 12 84
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe15g00885 Bpe_Chr15 FPKM 57.035503 64.979233 24.20167 24.47422 21.026243 19.043194 18.647184 23.989269 23.694574 22.828876