Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g00914 ATGTGTTTTGTTAACTGTAATGAGAGTAATTTCTGGTGCAGGTCAGCTACCGACCCTGCTAATCCTTACTCAAACGCTCCTATGGTGGCTTCTGGAAATCCTTCTGTTGCCGTCCCTTCTCCAAATCAGCCCCCAGTCCCTTTTTCTAACTCACCTCACCAGCTTGCATACCAGCAGGCACAGTACTTCCATCAGCAGCAGCAGCAGCAGCAACTTCAAATGTTTTGGGCCAACCAAATGCAAGAAATTGAGCAGACAACTGACTTCAAGAACCACAGTCTTCCGCTCGCTAGGATAAAGAAAATAATGAAAGCCGACGAAGACGTTCGAATGATATCAGCCGAAGCCCCGGTGATATTTGCAAAGGCATGTGAAATGTTCATTCTTGAGCTAACCTTACGCTCTTGGATTCACACAGAAGAGAACAAGAGAAGAACTCTTCAGAAAAATGACATTGCAGCTGCCATTTCAAGGACGGATGTCTTTGATTTCTTGGTCGATATTATTCCAAGGGATGAGTTGAAGGAGGAGGGATTGGGAGTGACGAAATGTGCACTCCCGGTTGGTTCCCCAGCCGATCTTCCATATTACTATGCCCCACCACACCCAGTTGGACCTGCAGGTATGATCATGGGGAAGCCGGTAGTAGATCAAGCAGCAATGTACGGAGCTCAACAGCCTCGACCACCTATGGCTTTCATGCCATGGCCCCATAGCCAGCCTCAGCCGGATCAAAACGAAGAATAA 747 47.66 MCFVNCNESNFWCRSATDPANPYSNAPMVASGNPSVAVPSPNQPPVPFSNSPHQLAYQQAQYFHQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGVTKCALPVGSPADLPYYYAPPHPVGPAGMIMGKPVVDQAAMYGAQQPRPPMAFMPWPHSQPQPDQNEE 248
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 18944838 18945584 + Bpe001837.1 Bpe15g00914 116593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g00914 248 MobiDBLite consensus disorder prediction 227 248 - -
Bpe15g00914 248 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-9 20 242 - -
Bpe15g00914 248 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 20 242 - -
Bpe15g00914 248 Gene3D Histone, subunit A 55 171 IPR009072 GO:0046982
Bpe15g00914 248 SUPERFAMILY Histone-fold 53 165 IPR009072 GO:0046982
Bpe15g00914 248 Pfam Core histone H2A/H2B/H3/H4 52 156 IPR007125 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe13g00200 Bpe-Chr13:9976332 Bpe15g00914 Bpe-Chr15:18944838 3.76E-69 dispersed
Bpe15g00222 Bpe-Chr15:13346986 Bpe15g00914 Bpe-Chr15:18944838 2.90E-69 dispersed
Bpe04g01628 Bpe-Chr4:22520131 Bpe15g00914 Bpe-Chr15:18944838 2.72E-11 transposed
Bpe05g00636 Bpe-Chr5:20211021 Bpe15g00914 Bpe-Chr15:18944838 4.56E-30 transposed
Bpe11g01366 Bpe-Chr11:10229589 Bpe15g00914 Bpe-Chr15:18944838 2.24E-69 transposed
Bpe12g00039 Bpe-Chr12:321227 Bpe15g00914 Bpe-Chr15:18944838 2.39E-122 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22636 PF00125 Histone 1.30E-18 CL0012 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g00914 K08066 - pop:7492093 363.229