Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g00916 ATGGCTACCAAGAGGAGCGTGGGCACTCTGACGGAGGCCGATTTGAACGGGAAGAGAGTGTTTATGAGAGTGGATCTGAATGTCCCGTTGGATGATAACTTCAATATCACTGACGACACCAGAGTCCGCGCTGCCGTGCCTACTATTAAGTACTTGTTAGGTCATGGAGCAAGGGTTATCCTTTCCAGCCACTTGGGACGCCCAAAAGGCGTGACACCCAAATATAGTTTGAAGCCTCTTGTGGCAAGACTGTCTGAACTCCTTGGCACTGAGGTTAAAATTGCTAACGATTGTATTGGCGAGGAAGTTGAGACATTGGTCGCTGAATTACCCAATGGAGGTGTATTGCTTCTTGAGAATGTGAGGTTCTACAAGGAGGAAGAGAAGAACGACCCTGAGTTTGCAAAGAAGCTAGCTTCTCTTGGAGATATCTATGTGAATGATGCATTTGGAACTGCTCATAGAGCTCATGCTTCAACAGAGGGAGTGGCTAAATACTTAAAACCTTCTGTTGCTGGATTTCTTATGCAGAAGGAACTCGACTATCTTGTTGGAGCTGTTGCAAATCCCAAGAGACCGTTTGCTGCCATTGTTGGTGGGTCAAAGGTATCTTCGAAGATTGGCGTGATTGAGTCATTATTGGAGAAGGTTGACGTTCTCTTGTTGGGAGGAGGAATGATCTTTACCTTCTACAAGGCGCAAGGGTATTCAGTTGGGTCATCCCTCGTTGAGGAAGACAAGCTTGATCTTGCTACCTCCCTTATGGAGAAGGCCAAAAATAAGGGGGTCTCTTTGCTACTTCCAACTGATGTGGTGATTGCTGAAAAATTTGCTCCTGATGCTAATAGCATGATTGTTCCGGCATCAGCTATCCCAGATGGTTGGATGGGATTGGATATTGGACCTGATTCGATCAAGACATTCAAGGAAGCTTTGGATTCAACAAAAACAATAATTTGGAATGGACCCATGGGCGTGTTTGAATTTGATAAGTTTGCTGCTGGAACAGAGGCAATTGCCAGGAAGCTTGCTGACCTCAGTGAAAAGAAGGTGACAACCATTATTGGAGGAGGAGACTCTGTGGCAGCAGTGGAAAAGGTTGGGCTTGCGGACAAGATGAGCCACATCTCCACCGGAGGTGGTGCCAGCTTAGAGCTTCTTGAAGGGAAGCCACTTCCGGGTGTCCTTGCTCTTGACGATGCT 1203 46.72 MATKRSVGTLTEADLNGKRVFMRVDLNVPLDDNFNITDDTRVRAAVPTIKYLLGHGARVILSSHLGRPKGVTPKYSLKPLVARLSELLGTEVKIANDCIGEEVETLVAELPNGGVLLLENVRFYKEEEKNDPEFAKKLASLGDIYVNDAFGTAHRAHASTEGVAKYLKPSVAGFLMQKELDYLVGAVANPKRPFAAIVGGSKVSSKIGVIESLLEKVDVLLLGGGMIFTFYKAQGYSVGSSLVEEDKLDLATSLMEKAKNKGVSLLLPTDVVIAEKFAPDANSMIVPASAIPDGWMGLDIGPDSIKTFKEALDSTKTIIWNGPMGVFEFDKFAAGTEAIARKLADLSEKKVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKPLPGVLALDDA 401
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 18968521 18971041 + Bpe024591 Bpe15g00916 116595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g00916 401 Pfam Phosphoglycerate kinase 11 390 IPR001576 GO:0004618|GO:0006096
Bpe15g00916 401 Gene3D - 8 184 IPR015824 GO:0004618|GO:0006096
Bpe15g00916 401 SUPERFAMILY Phosphoglycerate kinase 8 400 IPR036043 GO:0004618|GO:0006096
Bpe15g00916 401 Gene3D - 187 400 IPR015824 GO:0004618|GO:0006096
Bpe15g00916 401 Hamap Phosphoglycerate kinase [pgk]. 9 400 IPR001576 GO:0004618|GO:0006096
Bpe15g00916 401 CDD Phosphoglycerate_kinase 10 400 IPR001576 GO:0004618|GO:0006096
Bpe15g00916 401 PIRSF Pgk 3 401 IPR001576 GO:0004618|GO:0006096
Bpe15g00916 401 PRINTS Phosphoglycerate kinase family signature 113 128 IPR001576 GO:0004618|GO:0006096
Bpe15g00916 401 PRINTS Phosphoglycerate kinase family signature 317 342 IPR001576 GO:0004618|GO:0006096
Bpe15g00916 401 PRINTS Phosphoglycerate kinase family signature 14 30 IPR001576 GO:0004618|GO:0006096
Bpe15g00916 401 PRINTS Phosphoglycerate kinase family signature 172 194 IPR001576 GO:0004618|GO:0006096
Bpe15g00916 401 PRINTS Phosphoglycerate kinase family signature 195 214 IPR001576 GO:0004618|GO:0006096
Bpe15g00916 401 PRINTS Phosphoglycerate kinase family signature 141 163 IPR001576 GO:0004618|GO:0006096
Bpe15g00916 401 PRINTS Phosphoglycerate kinase family signature 376 393 IPR001576 GO:0004618|GO:0006096
Bpe15g00916 401 PRINTS Phosphoglycerate kinase family signature 36 58 IPR001576 GO:0004618|GO:0006096
Bpe15g00916 401 PRINTS Phosphoglycerate kinase family signature 353 364 IPR001576 GO:0004618|GO:0006096
Bpe15g00916 401 PANTHER PHOSPHOGLYCERATE KINASE 3 401 - -
Bpe15g00916 401 PANTHER PHOSPHOGLYCERATE KINASE 3 401 IPR001576 GO:0004618|GO:0006096
Bpe15g00916 401 ProSitePatterns Phosphoglycerate kinase signature. 19 29 IPR015911 GO:0004618|GO:0006096
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g01281 Bpe-Chr3:31338628 Bpe15g00916 Bpe-Chr15:18968521 5.30E-37 transposed
Bpe07g00471 Bpe-Chr7:7570316 Bpe15g00916 Bpe-Chr15:18968521 0 transposed
Bpe12g00036 Bpe-Chr12:303974 Bpe15g00916 Bpe-Chr15:18968521 4.73E-45 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g00916 K00927 - tcc:18594857 711.835