Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g00919 ATGCACAAATTGGGCAGAGGTCACCGTGACAAACTCCAGCAGTTTATGACTATAACTGGTGCGAGTGAAAAAATTGCTCTTCAGGCTTTGAAAGCAAGTGATTGGCATCTTGAAGGAGCATTTGATGCATTTTACAGTCAACCGCATATTAAAACATTTACTGATTCGAGACATTTGGAAGAGCTTTATAATAGATATAGAGATCCTCACATTGATATGATACTGGCTGATGGTATCACTACCCTCTGCAGTGATATTCAGGTTGATCCTCAAGACATAGTCATGTTGGTTGTCTCGTGGCACATGAAGGCAAACACTATGTGTGAATTTTCAAAACAGGAGTTTATAGGTGGATTGCTATCCTTGGGGATTGATTCCCTTGAGAAATTTCGGGAAAGGATACCATTTATGCGCTCAGAGCTGAAAGATGAACATAAGTTCCGTGAAATCTACATCTTTGCATTTGGATGGGCAAAAGAAAAGGGTCAAAAATCTCTGGCATTGGACACGGCTATAGGAATGTGGCAATTACTGTTTGCTGAAAGCCAGTGGCCCCTGGTTGATCACTGGTGTCAATTCCTACAGGTTCGACACAATAAAGCAATCTCAAGGGACACATGGTCTCAGCTATTGGAGTTTGCGAGGACTATAGACCCTACACTATCAAATTACGACGCTGAAGGAGCTTGGCCATACCTAATTGATGAATTTGCCGAATACTTAAATGAGAATGGGGTTATCCAAAATGATCAGTTGGATAATTTGAGCTCCAAACGATGA 780 41.28 MHKLGRGHRDKLQQFMTITGASEKIALQALKASDWHLEGAFDAFYSQPHIKTFTDSRHLEELYNRYRDPHIDMILADGITTLCSDIQVDPQDIVMLVVSWHMKANTMCEFSKQEFIGGLLSLGIDSLEKFRERIPFMRSELKDEHKFREIYIFAFGWAKEKGQKSLALDTAIGMWQLLFAESQWPLVDHWCQFLQVRHNKAISRDTWSQLLEFARTIDPTLSNYDAEGAWPYLIDEFAEYLNENGVIQNDQLDNLSSKR 259
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 18986931 18989995 - Bpe001841.1 Bpe15g00919 116598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g00919 259 Gene3D - 6 47 - -
Bpe15g00919 259 ProSiteProfiles DCUN1 domain profile. 54 242 IPR005176 -
Bpe15g00919 259 PANTHER DEFECTIVE IN CULLIN NEDDYLATION PROTEIN 13 249 - -
Bpe15g00919 259 SUPERFAMILY UBA-like 7 46 IPR009060 GO:0005515
Bpe15g00919 259 Pfam Cullin binding 130 240 IPR005176 -
Bpe15g00919 259 Gene3D - 52 142 - -
Bpe15g00919 259 Pfam UBA-like domain 9 47 - -
Bpe15g00919 259 Gene3D Cullin, PONY binding domain 143 251 IPR042460 -
Bpe15g00919 259 PANTHER RP42 RELATED 13 249 IPR014764 -
Bpe15g00919 259 CDD UBA_DCNL 8 48 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00582 Bpe-Chr3:26091829 Bpe15g00919 Bpe-Chr15:18986931 3.35E-29 dispersed
Bpe09g00438 Bpe-Chr9:11252152 Bpe15g00919 Bpe-Chr15:18986931 1.50E-25 dispersed
Bpe12g00034 Bpe-Chr12:293447 Bpe15g00919 Bpe-Chr15:18986931 8.31E-179 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g00919 K17822 - tcc:18594929 476.478