Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g00920 ATGCAGTGTCTTCAATCCCCAATAATAATCTGCATTTTAGACCCTGAGATTTTAGCTTTTTATCCCTTTTCTGAGTGCGATTTTGATTTCTTGATTGTAGGTAAGCAATATAGGATTGCTGAGTATTACAAGAACCAAAAGATGCTCATCCAAGGGTTTGATGAGATGGAGACCATGAATGAATCTGGTTCTTTTCCTGGAAATCTAACTGAGGACGAAATAAATCGGCTTGCGAGAAGCGAGAGGATAGCAGTTCACGCGTCAAACATAGCCAATATCGTTCTTTTCGTGGCGAAAGTTTATGCATCAGTCGAGAGTAGATCATTGGCTGTCATAGCGTCAACTTTAGATTCCTTCTTGGATCTCATCTCAGGGTTTATTCTCTGGTTCACCGCCAATGCCATGAAAAACCCAAACCACTATCACTATCCAATCGGAAAAAATCGAATGCAGCCCGTGGGCATCATCGTGTTTGCATCAGTAATGGCGACTCTCGGGTTACAAATACTGTTGGAGTCTGCTCGGCAACTCCTTACAAAGTCTAAGCCCAACACAGATGGAGAGAAGGAGAAGTGGATGATCGCGATTATGCTATTTGCCATGGTCGTGAAGTTTGTGCTAATGATCTACTGCAAAAGATTTAGAAACGACATAGTCAGAGCCTATGCTCAAGATCATTTTTTCGACGTCATCACAAATTCAGTCGGCCTGGGAGCCGCCCTTCTGTCCATCCATTTCTTCTGGTGGATCGATCCCACAGGCGCCATAATAATAGCACTCTACACAATAAACACATGGGCAAGGACGGTAAAGGAAAACGTGAGGTCGCTGATCGGAAGAACGGCACCGCCGGATTTCTTGGCAAAGATAACGTACTTGATATGGAACCACGACAAGGAGATAAGGCAGATAGATACGGTGAGGGCGTACACATTTGGAAGCCATTACTTTGTGGAAGTAGACATAGTTTTGGCGGAGGACATGCTGCTGAGCCAAGCTCATAACATCGGGGAGACTTTGCAAGAGAAGCTGGAGCAGCTTCCTCAGGTGGAGCGCGCATTCGTGCACATTGATTTCGAGTTCACTCACGCCCCTGAGCACAAGCCCAAGCTCAAGCCTTGA 1122 45.45 MQCLQSPIIICILDPEILAFYPFSECDFDFLIVGKQYRIAEYYKNQKMLIQGFDEMETMNESGSFPGNLTEDEINRLARSERIAVHASNIANIVLFVAKVYASVESRSLAVIASTLDSFLDLISGFILWFTANAMKNPNHYHYPIGKNRMQPVGIIVFASVMATLGLQILLESARQLLTKSKPNTDGEKEKWMIAIMLFAMVVKFVLMIYCKRFRNDIVRAYAQDHFFDVITNSVGLGAALLSIHFFWWIDPTGAIIIALYTINTWARTVKENVRSLIGRTAPPDFLAKITYLIWNHDKEIRQIDTVRAYTFGSHYFVEVDIVLAEDMLLSQAHNIGETLQEKLEQLPQVERAFVHIDFEFTHAPEHKPKLKP 373
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 18994390 18996058 + Bpe001842.1 Bpe15g00920 116599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g00920 373 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 282 358 IPR036837 -
Bpe15g00920 373 TIGRFAM CDF: cation diffusion facilitator family transporter 87 358 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Bpe15g00920 373 Pfam Dimerisation domain of Zinc Transporter 283 358 IPR027470 -
Bpe15g00920 373 SUPERFAMILY Cation efflux protein transmembrane domain-like 80 279 IPR027469 -
Bpe15g00920 373 PANTHER METAL TOLERANCE PROTEIN 9 34 370 - -
Bpe15g00920 373 Gene3D Cation efflux protein, cytoplasmic domain 281 359 IPR036837 -
Bpe15g00920 373 PANTHER MITOCHONDRIAL METAL TRANSPORTER 1-RELATED 34 370 - -
Bpe15g00920 373 Gene3D Cation efflux protein transmembrane domain 82 277 IPR027469 -
Bpe15g00920 373 Pfam Cation efflux family 87 278 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01696 Bpe-Chr4:22881497 Bpe15g00920 Bpe-Chr15:18994390 1.03E-153 dispersed
Bpe06g00509 Bpe-Chr6:16280985 Bpe15g00920 Bpe-Chr15:18994390 4.95E-11 dispersed
Bpe11g00895 Bpe-Chr11:6605861 Bpe15g00920 Bpe-Chr15:18994390 1.60E-92 dispersed
Bpe15g00920 Bpe-Chr15:18994390 Bpe15g01097 Bpe-Chr15:20140056 1.50E-146 dispersed
Bpe15g00920 Bpe-Chr15:18994390 Bpe15g01300 Bpe-Chr15:21272509 4.78E-148 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g00920 - - dcr:108211948 566.614