Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g00923 ATGACGAAAAAACTCTGTATTCTGGTTCTTTTCCTCCCTGCCATGGCTTCCGGCCAGTGTCTGTGCGGCTCCGACGCCTCAGAACATAACGAAAATGACGCCCTCAAGTATAAATTAGCTTCTATTGCTTCTGTTCTGGTGGCCGGTGCAGTTGGAGTGAGCCTTCCTCTGTTTGGCAAGAAACTCCCGTCCTTGCGACCTGAAAACGACATTTTCTTCATGATCAAGGCCTTTGCAGCCGGGGTAATTTTAGCCACTGGCTTCGTACACATACTACCGGACGCATTTGAGAACTTGAACTCTCCGTGCTTGAGCAAGGAACCATGGGGAAAATTCCCGTTTGCTGGCTTCGTCGCTATGCTTTCATCCATTGGTACGCTAATGGTGGACACATTAGCTACAGGATTCTACAAGAGGCAGCACTTTGTTAAATCGAACCAGGTGACTCTAGACGAAGAAATCGCCGACGCGCATGCGGGTCATGTGCACGTTCATACGCATGCAACACACGGCCACGCTCATGGCTCTGCCTCCACCGACGAAGATATCGCTTCGCCGGAGCTGATCCGCCGCCGCATTATATCGCAAGTGTTGGAACTGGGGATCGTTATCCACTCTATCATAATCGGAGTATCTTTAGGTGCCTCTGGAAGTCCAGCGACGATAAAGCCGCTCTTAATAGCTCTATCATTCCACCAGTTTTTCGAAGGGATGGGGCTCGGCGGTTGCATCTCTCAGGCTGAATTCAAGTCCAGGTCAACGACAATAATGGCGACGTTTTTCTCCCTCACAACGCCGATCGGAATAGCGATAGGGATCGGAATATCAAGCTTCTACGAAGCGAACAACGCGAGAGCGCTGATGGTGGAAGGGATTTTGGAGTCAGCTTCGGCAGGAATACTGACTTATATGGCGCTGGTAGATCTACTGGCAGCTGATTTTATGAACCCAAGGATGCAGGCTAACCTCGGGCTTCAATTAGGAGCCCATGTATCTCTTCTTCTCGGAGCTGGTTGTATGTCTGTCTTGGCCAAATGGGCTTAA 1044 50.19 MTKKLCILVLFLPAMASGQCLCGSDASEHNENDALKYKLASIASVLVAGAVGVSLPLFGKKLPSLRPENDIFFMIKAFAAGVILATGFVHILPDAFENLNSPCLSKEPWGKFPFAGFVAMLSSIGTLMVDTLATGFYKRQHFVKSNQVTLDEEIADAHAGHVHVHTHATHGHAHGSASTDEDIASPELIRRRIISQVLELGIVIHSIIIGVSLGASGSPATIKPLLIALSFHQFFEGMGLGGCISQAEFKSRSTTIMATFFSLTTPIGIAIGIGISSFYEANNARALMVEGILESASAGILTYMALVDLLAADFMNPRMQANLGLQLGAHVSLLLGAGCMSVLAKWA 347
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 19009331 19010554 + Bpe001844.1 Bpe15g00923 116602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g00923 347 Pfam ZIP Zinc transporter 36 344 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Bpe15g00923 347 PANTHER ZINC/IRON TRANSPORTER 8 347 - -
Bpe15g00923 347 TIGRFAM zip: ZIP zinc/iron transport family 22 347 IPR004698 GO:0005385|GO:0016021|GO:0071577
Bpe15g00923 347 PANTHER METAL TRANSPORT PROTEIN 8 347 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe14g00262 Bpe-Chr14:2721292 Bpe15g00923 Bpe-Chr15:19009331 5.59E-89 dispersed
Bpe12g00033 Bpe-Chr12:286186 Bpe15g00923 Bpe-Chr15:19009331 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g00923 K14709 - pop:7481603 449.129