Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g00924 ATGATCAATAATGTCGAACTTTCAGTTTCCTCGTATGATACTGCTTGGGTGGCCATGGTCCCATCTCCTAACTCCCCAGATGCCCCATTTTTTCCTCAATGTGTGAACTGGTTATTGGAAAATCAGCGCAGTGATGGCTCATGGGGCCAAGCTCATTCGAATTCGTTGTTAATGAAGGACACTCTGTCATCTACCTTAGCATGCATAGTTGCTCTGAAGCGATGGGATGTTGGTTTGGAGCATATGAACAAGGGTTTAGATTTTATGAATAAAAATTTAGCTCTCGCTACTAATCCAAAGCAACATTCTCCTGTTGGGTTTAATATAATTTTCCCTGGTATGATTGAGATGTCTCAAAGTTTGGGTCTGAATCTTTTCCTAGAACATACAAGTTTAAATGCTTTGGTTCAGGAGAGAGAGTTGGAGCTTAGAAGAGGTAGAAGAGCCTATTTAGCTTATGTTTCTGAAGGAATTGGGAAACCAGACTGGGAAATGGTCATGAAATATCAAAGGAAAAATGGTTCACTATTTAACTCTCCGTCGACCTCTGCCGCTGCTTTTACTCACACAAAGAATGGCAGATGTCTTAATTACCTCTGCATGCTACTAGCGAAGTTTGGCAATGCAGTTCCAACAATATATCCTCTCGACCTAACTGCTCGCTTACACATGGTCGATGACCTTCAAAAATTGGGAATTGGTCGACATTTTCAGAAGGAAATCAAAAGTGTGTTTGACGAAATTTATAGATGCTGGCTGCAGGGAGAGGAAGACATATTTCTTGACGTCAGCACTTGCGCTATGGCCTTCCGGTTATTACGAGTCAATGGATACAATGTTTCTTCAGATCTCCTAACTCAATTTACAGAGGAAGATGAGTTTTCCAATTGTCTTGGAGGGTATCTGAATGACATTGCCTCCACTCTAGAATTATTCAAGGCTTCGCAAATTAGGTTACATTCAGACGAGCATATTCTTGAACAAGTAAATTCCTGGACAAGGAATTTCCTGAATTGCAAATCATTAATAAATACAACACGAAAGGATACACTCTCCAATGACATTGAGGAAGAGGTGAAAGATGCTCTTAAGTTTACCTATCATTCAACTTTGGAACGAATTTCAAACAAAAAGGCTATAGATCATTACAGCACAGAGAGTACAAGAATCTTAAAAAGTTCATATAGGTGCCCAAATTTCGGTCATGAAGATCTCCTAAAGCTAGCAGTAGACGACTATAATACATGTCAAAGTATACATCGTAAAGAACTTGAAGATATCGCAAGCAGGTGGGTCGTAGAGACAAAATTGGACAAGCTCAAGTTTGCCAGACAAAAATTGGAGTATTGCTACTTCTCGGCTTCGGCATCCCTTCCTTCTCCCGAACTTTCTGAAGCCCGTTTATCATGGACCAAGGCCGGGGTCCTCACAACAGTAGTTGACGATTTCTTTGATGTTGGTGGCTCTGAAGAGGAACTAATTAACCTAATACAATTGGTTGAGAGGTGGGATATAAATTCAGGTGTGGATTATTGTTCAGAGCCAGTCGAGATTATATTTACAGCTCTTCATGGCACAGTTTGTGAGATTGGCGACAGAGCCTCAATACGCCAAGGGCGCCCGGTAACGGGTCACATAATTGACATATGGTTGGACCTGCTAAAGTCTATGCTGAAGGAATTCGAATGGATGAGAGACAAAGTAGTCCCACCCATGGATGATTATATGTCAAATAGTTGCATATCATTTGCCTTGGGACCTATAATCCTTCCGGCCCTCTATTTTGTCGGTCCAAAGCTTTCGAAGGAGGTAATTGGAAATGTGGAATATAGAAATCTATTTAACCTGATGAGTACTTGCGGGCGTCTTCTCAACGACATACAGGGTTTCGAGAGGGAATCCAGAGAAGGGAAATTGAATGCTATGTCGATGCTTATGATGGACGGTGGTGGTGACACTGAAACCAGAGAGAAAGCTGTTGAAGGGGTGAAGGTATCGATTGAGAAGACGATTGAGAAGGCGAGAAGAGAACTTCTGAGATCAGTTTTGGGGGAAGTGGGTAGCACAATTCCAAGAGCTTGCAAGGATTTGTTCTGGAAAATGAGCCAAGTGTTGCACCTTTTTTACATGAACTGTGATGGGTTTACCTCTCGAGAGTTGATGAAGGAGGCCAAGGCATTGATTAGAGAACCCATAGTTCTAGACCTGTTAAAATAA 2217 41.63 MINNVELSVSSYDTAWVAMVPSPNSPDAPFFPQCVNWLLENQRSDGSWGQAHSNSLLMKDTLSSTLACIVALKRWDVGLEHMNKGLDFMNKNLALATNPKQHSPVGFNIIFPGMIEMSQSLGLNLFLEHTSLNALVQERELELRRGRRAYLAYVSEGIGKPDWEMVMKYQRKNGSLFNSPSTSAAAFTHTKNGRCLNYLCMLLAKFGNAVPTIYPLDLTARLHMVDDLQKLGIGRHFQKEIKSVFDEIYRCWLQGEEDIFLDVSTCAMAFRLLRVNGYNVSSDLLTQFTEEDEFSNCLGGYLNDIASTLELFKASQIRLHSDEHILEQVNSWTRNFLNCKSLINTTRKDTLSNDIEEEVKDALKFTYHSTLERISNKKAIDHYSTESTRILKSSYRCPNFGHEDLLKLAVDDYNTCQSIHRKELEDIASRWVVETKLDKLKFARQKLEYCYFSASASLPSPELSEARLSWTKAGVLTTVVDDFFDVGGSEEELINLIQLVERWDINSGVDYCSEPVEIIFTALHGTVCEIGDRASIRQGRPVTGHIIDIWLDLLKSMLKEFEWMRDKVVPPMDDYMSNSCISFALGPIILPALYFVGPKLSKEVIGNVEYRNLFNLMSTCGRLLNDIQGFERESREGKLNAMSMLMMDGGGDTETREKAVEGVKVSIEKTIEKARRELLRSVLGEVGSTIPRACKDLFWKMSQVLHLFYMNCDGFTSRELMKEAKALIREPIVLDLLK 738
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 19012528 19016023 - Bpe001845.1 Bpe15g00924 116603

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g00924 738 Pfam Terpene synthase, N-terminal domain 162 363 IPR001906 GO:0010333|GO:0016829
Bpe15g00924 738 CDD Terpene_cyclase_plant_C1 214 731 IPR044814 GO:0010333|GO:0016102
Bpe15g00924 738 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 172 386 IPR008930 -
Bpe15g00924 738 Pfam Terpene synthase family, metal binding domain 406 670 IPR005630 GO:0000287|GO:0010333|GO:0016829
Bpe15g00924 738 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 11 182 IPR008930 -
Bpe15g00924 738 Gene3D - 3 413 IPR036965 GO:0010333|GO:0016829
Bpe15g00924 738 PANTHER ENT-KAUR-16-ENE SYNTHASE, CHLOROPLASTIC 4 730 - -
Bpe15g00924 738 SUPERFAMILY Terpenoid synthases 402 732 IPR008949 -
Bpe15g00924 738 Gene3D Farnesyl Diphosphate Synthase 416 736 IPR008949 -
Bpe15g00924 738 SFLD Terpene Cyclase Like 1 N-term 5 399 - -
Bpe15g00924 738 PANTHER ENT-COPALYL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC 4 730 - -
Bpe15g00924 738 Gene3D - 8 203 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g00924 K04121 E4.2.3.19; ent-kaurene synthase [EC:4.2.3.19] - qsu:112027063 909.827
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe06g00472 Bpe-Chr6:16023755 Bpe15g00924 Bpe-Chr15:19012528 1.14E-87 dispersed
Bpe10g00412 Bpe-Chr10:11595987 Bpe15g00924 Bpe-Chr15:19012528 2.38E-78 dispersed
Bpe12g00031 Bpe-Chr12:276984 Bpe15g00924 Bpe-Chr15:19012528 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g1165 Blo04g00457 . . . . . Bma08g00824 . . . . . . . . . . Bhi05g01987 . . . . . . . . . . . . . . . . . . Csa07g01217 . . . . . . Bpe15g00924 . Bma03g00490 . . . . . . . . Cpe15g00909 . . . . . . . . . . . . . . . . . Chy01g00846 Cme01g01495
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003981 2 5 2 2 2 1 1 1 1 1 1 1 1 1 1 1 1 3 1 1 1 2 1 2 2 1 1 1 2 1 44
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe15g00924 Bpe_Chr15 FPKM 23.208773 26.371202 32.388466 31.762955 25.032887 26.102028 22.903839 16.069036 17.280281 14.66248