Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g00926 ATGTTCCACCCAAAGAAGCCATCAACTATGAATTCTCATGATCAAAGATCTTCTATGTGTGTCCAAGGTGACTCGGGACTAGTCCTAACCACCGACCCGAAGCCCCGCCTACGGTGGACTGCTGAGCTCCATGCTCGCTTTGTCGACGCAGTCACCCAGCTTGGAGGCCCTGATAAAGCAACCCCAAAAACCATCATGAGGGTTATGGGTGTGAAGGGTCTTACTCTTTACCACCTCAAAAGCCACCTTCAGAAATTTAGGCTTGGGAAGCAGCCTCATAAGGAATTCGCCGATCACTCCATGAAGCATGCTTCTTCGTTAGAACTTCAACGAAACGCAGCATCTTCATCAAATATTATTGGCCGCAATAAGAACGATAACTCGCACATGGTGGATGCAATTAAGATGCAGATGGAGGTGCAGAGAAGACTGCATGAACAACTAGAGGTGCAAAGACACCTTCAACTGAGAATCGAAGCACAAGGGAAGTACATGCAAAATATACTAGAAAAGGCTTGTCAAACTCTTGTCGGTGAGAATATGGGCTGTGGAGGATCGTCCTTTAAGACAATGGTTCCATGTTTTCAAGACCTGAACATTTGTGGTGGAGACCAGCTAGATCTGGAGCAAAATATAGATAATTTTCTTCCGGTCAATGACGATATTTGTCTCGAAAAGAAGGCAGGAAGCTCGTATAGCAATGGTGGAAAGAGCCCTCTTCTTTGGTCAGATGATCTTCAACTTCACATGTTGGGACCGACGATGACTTCTTCTGCTGGTTTTAAAGGAGAGAGAGTCGTCGATCTAGACTCCATTTCTGATATCTATGACAAAAAACCATAG 843 45.2 MFHPKKPSTMNSHDQRSSMCVQGDSGLVLTTDPKPRLRWTAELHARFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFADHSMKHASSLELQRNAASSSNIIGRNKNDNSHMVDAIKMQMEVQRRLHEQLEVQRHLQLRIEAQGKYMQNILEKACQTLVGENMGCGGSSFKTMVPCFQDLNICGGDQLDLEQNIDNFLPVNDDICLEKKAGSSYSNGGKSPLLWSDDLQLHMLGPTMTSSAGFKGERVVDLDSISDIYDKKP 280
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 19025279 19026637 + Bpe001847.1 Bpe15g00926 116605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g00926 280 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 31 91 IPR017930 -
Bpe15g00926 280 SUPERFAMILY Homeodomain-like 33 89 IPR009057 -
Bpe15g00926 280 PANTHER MYB FAMILY TRANSCRIPTION FACTOR APL 1 251 - -
Bpe15g00926 280 Pfam Myb-like DNA-binding domain 37 85 IPR001005 -
Bpe15g00926 280 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 34 89 IPR006447 GO:0003677
Bpe15g00926 280 Gene3D - 33 91 - -
Bpe15g00926 280 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 1 251 IPR044848 GO:0003700
Bpe15g00926 280 Pfam MYB-CC type transfactor, LHEQLE motif 130 175 IPR025756 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe07g00477 Bpe15g00926 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g01644 Bpe-Chr11:12578540 Bpe15g00926 Bpe-Chr15:19025279 1.17E-48 dispersed
Bpe13g00855 Bpe-Chr13:14754415 Bpe15g00926 Bpe-Chr15:19025279 5.23E-71 dispersed
Bpe14g00844 Bpe-Chr14:6325672 Bpe15g00926 Bpe-Chr15:19025279 8.95E-69 dispersed
Bpe07g00477 Bpe-Chr7:8171923 Bpe15g00926 Bpe-Chr15:19025279 9.69E-109 transposed
Bpe12g00030 Bpe-Chr12:272030 Bpe15g00926 Bpe-Chr15:19025279 1.83E-141 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22637 PF00249 Myb_DNA-binding 2.80E-06 CL0123 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g00926 - - vri:117908572 394.045