Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g00927 ATGGGAAAGAAGGCTGTATTGATCGGATGCAATTATCCGGGAACTAAGGCTGAGCTCAAAGGCTGCATCAATGATGTTAAGAGGATGTACCAGTGTCTCATCGATCGCTACGGTTTCTCCGAAGACGACATCACCGTCCTCATCGACACCGACGATTCTTACACTCAGCCCACTGGAAAAAACATTCGCGCTGCCTTAGCGCATCTGGTTGGATCGGCGGAGGCTGGGGATATTCTCTTTGTTCACTACAGCGGACATGGGACTCGTCTTCCGGCCGAGACCGGGGAGGAAGACGATACTGGCTACGATGAGTGCATCGTCCCTTGTGATATGAACCTCATCACTGATGAGGATTTCAAGGAGTTAGTAGAGAAAGTACCAGAGGATTGCCGTCTCATCATTGTCTCAGATTCTTGCCACAGTGGTGGTCTCATTGAAAATACCAAAGAACAGATAGGCGAGAGCACTAAGCGTCTTGCCCAGCACGAAGAGGAACCATCCTCCCATTTTGGATTCAGGAGCTTTCTGCATCAGACTGCCCAAAGTGCTTTGGAGTCCCGTGGTATACAACTTCCATCTGCACTGCGTCATGTTCATCGCCATCATAATCCCGATGAAGAAGAATCAGCCCGAGAGGTTGACATTGGATATGAAGGGGGAGGCTATGTCAAAAATAGGTCACTTCCTCTCTCCACTCTCATTGACATCCTGAAGCAGAAAACAGGGAAAGACGACATAGATGTGGGGAAGCTACGACCAAGCCTGTTCGATATATTTGGGGAGGATTCCAGCCCAAAGGTGAAGAAATTCATGAAGATCATCATGACTAAACTCCAACATGGTGAAGGGGAAAACGAAGATGGTGGTTCTAGTGGGATGTTTGGAATGATTGGCAATTTGGCCCAGGAGTTCTTGAAGCAAAAGCTAGAAGAAAACAATGAAGACTATGCAAAACCTGCGATGGAAACTGATGTGGGGGGTAAAGAGGAGGTCTATGCAGGGGCAACAAAGCGTTCATTTCCTCAGAATGGAATTTTGATCAGTGGATGCCAAACTGACCAAACTTCAGCGGATGCCAGCCCCTCTGGAAATTCAGCAAATGCTTACGGTGCTCTGAGCAATGCAATTCAGACCATACTTGAAGAATCAGATGGCTCAGTTACTTACCAGGAGCTGGTTTTGAAGGCCAGGGAGAAACTGAAGGGCCAAGGCTTCACCCAGCGACCTGGTCTCTATTGCTCGGATGACCATGCTGATGCTCCTTTTGTTTGCTAA 1275 48.08 MGKKAVLIGCNYPGTKAELKGCINDVKRMYQCLIDRYGFSEDDITVLIDTDDSYTQPTGKNIRAALAHLVGSAEAGDILFVHYSGHGTRLPAETGEEDDTGYDECIVPCDMNLITDEDFKELVEKVPEDCRLIIVSDSCHSGGLIENTKEQIGESTKRLAQHEEEPSSHFGFRSFLHQTAQSALESRGIQLPSALRHVHRHHNPDEEESAREVDIGYEGGGYVKNRSLPLSTLIDILKQKTGKDDIDVGKLRPSLFDIFGEDSSPKVKKFMKIIMTKLQHGEGENEDGGSSGMFGMIGNLAQEFLKQKLEENNEDYAKPAMETDVGGKEEVYAGATKRSFPQNGILISGCQTDQTSADASPSGNSANAYGALSNAIQTILEESDGSVTYQELVLKAREKLKGQGFTQRPGLYCSDDHADAPFVC 424
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 19033013 19034622 - Bpe001848.1 Bpe15g00927 116606

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g00927 424 Pfam Caspase domain 3 417 - -
Bpe15g00927 424 Gene3D - 315 422 - -
Bpe15g00927 424 Gene3D - 1 189 - -
Bpe15g00927 424 PANTHER METACASPASE-5 1 424 - -
Bpe15g00927 424 Coils Coil 145 165 - -
Bpe15g00927 424 PANTHER METACASPASE-4 1 424 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g00927 - - - vvi:100241522 637.491
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe14g00862 Bpe-Chr14:6432871 Bpe15g00927 Bpe-Chr15:19033013 1.11E-25 dispersed
Bpe15g00927 Bpe-Chr15:19033013 Bpe13g00879 Bpe-Chr13:14924483 3.15E-27 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g1182 Blo04g00453 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Bpe15g00927 . Bma03g00487 . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006948 1 1 1 2 1 1 2 1 1 1 1 1 2 1 2 2 1 2 2 1 1 1 1 1 1 1 1 1 1 1 37
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe15g00927 Bpe_Chr15 FPKM 14.309174 17.10763 4.699018 4.426078 5.443223 5.366988 5.070446 7.562286 7.282117 7.730928