Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g00933 GACCAAAGTGAAGATGCTCAAAGGAAAGGCACTGATCTTAAAACCCTGCTTAGGAGATTGTGGAAAGTGGCAGCGCCGTACTGGTTTTCCGACGATAAAGTGCAGGCGAGATGGCAGTTGGCTGCTGTCTTTGCTCTCTCCTTAGGTACCACTGGTATCAGCGTCGGTTTCAATTTCCTCGGCCGCGACTTCTACAATGCCCTCGCCAACAAGGACCAGGAACAATTCACTAAACAACTCCTGTACTACCTGGGTGGCTTTGCGGGAGGTATTCCGTTCTTTGTATTGAGAGATTATGCAAGAGAAATTCTTGGGTTGAGATGGAGGTCTTGGATGACGAAGTATTACATGGAACGCTATCTTAAAAATCAGACATTTTACAAAATCCAGTCCAAATCAATTATTGATAATCCAGATCAGCGTATTGTTGATGATCTAAGTTCTTTCACTGGGACAGCCCTATCATTCTCACTGACGCTTTTCAATGCTGCAATTGACTTAATATCTTTTAGTAATATCTTATATGGTATCTATCCACCCCTCTTCGTCGTCCTTCTTTTATATTCAATTGGTGGAACAGCTATTAGTTTTTTCCTTGGAAGGGGATTGGTTACTCTCAATTTCTTGCAAGAGAAAAAAGAAGCAGATTTTCGTTATGGCCTTGTTCGTGTTCGAGAAAATGCTGAATCAATTGCCTTCTATGGTGGAGAAGAGAATGAGATGCAACTTTTGTTGCTTCGCTTCCGCAGTGCTTTTGAAAATTTAACAGAATTACTACTAGCATCCAGAAATCTTGATTTCTTCACCAGTGGATACCGCTATCTTATTCAAATTCTTCCTGCAGCTGTTGTTGCCCCAATGTTTTTCTCAGGGAAAATTGAATTTGGAGTTATCAATCAATCAGTATCTGCTTTTAACCATATCCTTGGAGATTTTTCAATTATTGTATATCAGTTTCAGGCTATCAGTGCATTTTCAGCTGTAATTGATCGACTAGGTGAATTTGATGACATTTTGGATGGCTGTAGTTCCAAAATTTTGTCCCATAGTTTGGAAGAGATACGGCTTCAATACTGTAATGTGAAAAGTTTGGCTTTATCAAATGGATATGTGGCCTCAGATAAGTGTCAGAAATTAGTAGATATAGAAAATTTGACGCTACACACGCCGTCTAGCGGAGCTACCCTTGTTAGAGACTTAACATTTGCTATAAAGGAGAAAGAGCATTTGCTGGTTGCTGGTCCTAGTGGAAGTGGAAAAACTTCGTTGTTAAGAGCCATGGCTGGTCTTTGGAACACTGGAAGTGGAAAAATTACATTTTATGTCAATGATCGCGTGTGTTTGCCAAATCCCATTTCTCCAGATGAAACTCCTCCTGAACTAACACCAGAATCTGAAAGGTCAATCAATAGAAATACTCTAGGGATATTTTTCCTTCCTCAGCGACCTTATATGGTGCTGGGTACTCTGCGAGAGCAGTTACTTTACCCTACATGGACTGGAGCTGCAACTCCTGCCTTAGATGCTAGCAAATCAACGAGTTTGCCTTCCTTCTTGTCGGGTTTACCAAAGTCAGAAAGTGGTAACGAAAAGCCTGGAAAACCGACGACAGATGATCTAATCCAGGTTTTAGAGGATGTTCGGCTGGGATATTTATTGAATCGATTCAGTAATCTGGACGTAACATGTGAATGGTCCAGTGTTCTTTCCCTTGGTGAGCAGCAACGCCTGGCGTTTGCACGACTTCTGCTTTTAAAACCAAAACTGGTTTTGTTGGATGAATCTACCAGTGCTCTAGACGAAGCAAACGAGAGTCATCTATATCATGAGATAGAAGCGGCGGGCATAACCTATGTTAGCATTGGCCATCGGCGAACTTTGTATAATCACCATAAAAAAGTTCTGCACATATCCACCCCTAGTGGCTCTGAAGGGAATTGGCATATGGAACCCATTAGCCGTGACACCCTTTACAGTTCATCAAATCGCTAA 1992 41.57 DQSEDAQRKGTDLKTLLRRLWKVAAPYWFSDDKVQARWQLAAVFALSLGTTGISVGFNFLGRDFYNALANKDQEQFTKQLLYYLGGFAGGIPFFVLRDYAREILGLRWRSWMTKYYMERYLKNQTFYKIQSKSIIDNPDQRIVDDLSSFTGTALSFSLTLFNAAIDLISFSNILYGIYPPLFVVLLLYSIGGTAISFFLGRGLVTLNFLQEKKEADFRYGLVRVRENAESIAFYGGEENEMQLLLLRFRSAFENLTELLLASRNLDFFTSGYRYLIQILPAAVVAPMFFSGKIEFGVINQSVSAFNHILGDFSIIVYQFQAISAFSAVIDRLGEFDDILDGCSSKILSHSLEEIRLQYCNVKSLALSNGYVASDKCQKLVDIENLTLHTPSSGATLVRDLTFAIKEKEHLLVAGPSGSGKTSLLRAMAGLWNTGSGKITFYVNDRVCLPNPISPDETPPELTPESERSINRNTLGIFFLPQRPYMVLGTLREQLLYPTWTGAATPALDASKSTSLPSFLSGLPKSESGNEKPGKPTTDDLIQVLEDVRLGYLLNRFSNLDVTCEWSSVLSLGEQQRLAFARLLLLKPKLVLLDESTSALDEANESHLYHEIEAAGITYVSIGHRRTLYNHHKKVLHISTPSGSEGNWHMEPISRDTLYSSSNR 663
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 19106190 19111071 + Bpe001855.1 Bpe15g00933 116612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g00933 663 Gene3D - 352 647 IPR027417 -
Bpe15g00933 663 PANTHER ATP-BINDING CASSETTE SUB-FAMILY D MEMBER 3 4 653 - -
Bpe15g00933 663 Pfam ABC transporter 398 597 IPR003439 GO:0005524
Bpe15g00933 663 MobiDBLite consensus disorder prediction 518 537 - -
Bpe15g00933 663 SUPERFAMILY ABC transporter transmembrane region 18 335 IPR036640 GO:0005524|GO:0016021
Bpe15g00933 663 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 41 324 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bpe15g00933 663 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 380 656 IPR003439 GO:0005524
Bpe15g00933 663 PANTHER ATP-BINDING CASSETTE, SUB-FAMILY D MEMBER 4 653 - -
Bpe15g00933 663 Pfam ABC transporter transmembrane region 2 29 289 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bpe15g00933 663 Gene3D ABC transporter type 1, transmembrane domain 2 338 IPR036640 GO:0005524|GO:0016021
Bpe15g00933 663 SMART AAA_5 406 641 IPR003593 -
Bpe15g00933 663 ProSitePatterns ABC transporters family signature. 569 583 IPR017871 GO:0005524
Bpe15g00933 663 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 376 637 IPR027417 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe12g00600 Bpe-Chr12:11718500 Bpe15g00933 Bpe-Chr15:19106190 1.63E-34 dispersed
Bpe15g00933 Bpe-Chr15:19106190 Bpe04g01570 Bpe-Chr4:22031978 5.83E-07 dispersed
Bpe15g00933 Bpe-Chr15:19106190 Bpe11g01560 Bpe-Chr11:11603424 1.18E-08 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g00933 - - pvy:116142004 980.319