Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g00954 ATGTCTAATTCGGAAGGTGGTAATAACGGCGTCGTCAACGGCGCTTTAATTGACCCTCAGAGGCAACAGCCGCCGGCGAATGGAGCGCTTGTTGTCAAAAAGCCGCCCTCTAAAGACCGCCACAGTAAGGTCGACGGTCGAGGTCGCCGTATTCGGATGCCGATCATTTGCGCCGCCCGTGTGTTTCAGCTCACTAGAGAGCTTGGACACAAGTCCGATGGTCAGACTATCGAGTGGCTTCTAAGGCAAGCTGAGCCTTCGATCATAGCTGCGACGGGAACTGGTACTACTCCTGCCAGCTTCTCTTCAGTTTCCGTATCCGTCAGAGGCGGCGGCGTCGGTTCGAGTTCGCTCTCTACCTCTTCCACTACGTCCTCTCTATCCCTTTCTCGGCCCCAGGCCTTCTCCGGACCCACCCCCTTTATTCTCGGTAAGCGTGTAAGAACCGACGACGACGGAGGAGCTGGAGCTAAGGACGAAGTTGTATCCGTCGGTCCCACGATGGGTTCCATAGTGGGTCCCTCCGCCGCCGGTGGATACTGGGCCATTCCGGCCAGACCGGACTTTGGGCAGATTTGGAGCTTTGCTACGGGGACGGCAGCGCCGGAATTGATCCACCCTTCCGCGGTGACTCATCAGGGCTCTCTATTTGTTCAGCAGCAACAGGCGATTGGAGAGGCTTCGGCGGCACGGGTGGGGAATTACCTTCCGGGACATTTGAATTTACTGGCTTCGTTATCAGGTGGAACCGGCAATTCAGGTCGGAGAGAAGATGACCAACGTTAA 786 56.62 MSNSEGGNNGVVNGALIDPQRQQPPANGALVVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSSVSVSVRGGGVGSSSLSTSSTTSSLSLSRPQAFSGPTPFILGKRVRTDDDGGAGAKDEVVSVGPTMGSIVGPSAAGGYWAIPARPDFGQIWSFATGTAAPELIHPSAVTHQGSLFVQQQQAIGEASAARVGNYLPGHLNLLASLSGGTGNSGRREDDQR 261
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 19232675 19233460 - Bpe001875.1 Bpe15g00954 116633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g00954 261 MobiDBLite consensus disorder prediction 34 49 - -
Bpe15g00954 261 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 1 258 - -
Bpe15g00954 261 MobiDBLite consensus disorder prediction 112 132 - -
Bpe15g00954 261 ProSiteProfiles TCP domain profile. 37 91 IPR017887 -
Bpe15g00954 261 MobiDBLite consensus disorder prediction 1 49 - -
Bpe15g00954 261 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 258 IPR005333 GO:0003700
Bpe15g00954 261 Pfam TCP family transcription factor 37 121 IPR017887 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe15g00954 Bpe-Chr15:19232675 Bpe11g01829 Bpe-Chr11:14709891 1.61E-37 dispersed
Bpe12g00011 Bpe-Chr12:139554 Bpe15g00954 Bpe-Chr15:19232675 5.47E-148 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22641 PF03634 TCP 2.40E-32 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g00954 K16221 - cpap:110813909 340.117