Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g00970 TTTGCAGGAATGTTTCAAGGGGATGGATCATCATCTTCATCAGTGACAGCACCAACTCTACTCTTCCCATGGACCCTATCTCCAGGGATAGGTTCACCATACCCGTTTCTGAGAGAGCTCAAATCAGAAGAAAGAGGCCTGTGTCTGATTCATCTTCTCCTCGCCTGTGCTAGCCATGTTGCGGCTGGTCATATGGAATATGCAAATATTGGGCTTGAGCATATTTCCCAACTTGCCTCTCCTGACGGTGACACTATGCAGCGAATTGCTGCTTATTTCACGGAAGCACTTGCCGATCGAGTTCTCAAAGCTTGGCCTGGTTTACACAAAGCTCTGAATTCGACCAAAATATCTTCCGTTTCAGAGCAAATCTTTGTCCAAAGACTCTTCTTTGAAATCTGCCCCTTCTTCAAGCTTGCATATCTGATCACAAACCAGGCGATTGTAGAAGCAATGAAAGGAGAAAAGATGATTCATATTATCGATTTTAATTCTTTTGAGCCCGCCCAGTGGATTAATCTTCTTCAGACATTGAAGGAGCGGCCGGAAGGGCCACCCCATGTGAGAATCACTGGGATTCATGAGCAGAAAGAAGTGCTGGAACAAATGGCTATTCGGTTGAACGACGAAGCCGAGAAATTAGACATTCCCTTTCAGTTCATTTCAATAGTGAGCAGATTAGAAAATCTAGATTTCGAAAGTTTGCGTGTTAAGACTGGCGAAGCACTTGCAGTCAGCTCTGTTCTAGAGCTTCACTCCCTTTTGGCCAATGACGAGGAGAGAAAAAGCTCACCATCGACTTCCACCAATATTCAGAAAATTTTACATGTTAAACAGCGAACTTTGGGAGAGTGGTTCGAGACAGACTCGATGCCGCTTTTCAGCAGTCCTGATTCGGCATCCACATCTTCCCCATTGTCGCTAAGTCCTTCACAGAAGATGGGAAGTTTCCTAAACGCACTTTGGGGACTTTCGCCGAAAATAATGGTAATAACCGAGCAAGAATCTAACCTCAATGGTTGTACTTTTATGGAGAGGGTCAGGGAAGCTTTAAACTTCTACGCAGCTTTGTTCGATTGCTTGGAATCGACGGTCTCTAGATCATCCCTGGAGAGACAGAAGGTCGAGAAGATGCTATTTGGAGAAGAAATCAAGAATATCATTGCATGTGAGGGAGCTGAGAGGAAAGAAAGGCATGAGAAGCTCGAGAAATGGATTTTACGGCTTGAAGTTGCAGGGTTCGGAAGGGTGCCCTTAAGCTACCATGGTAGGTTGCTGGCCGGTAAGCTGTTGCAGAACTACGGCTATGACGGGTATAAGATTAAAGAAGAGAATGGATATTTGTTTATATGTTGGCAGGATAGGCCGCTCTTCTCGGTCTCAGCATGGAGCCTTCGGAGGAATGACTGA 1410 45.25 FAGMFQGDGSSSSSVTAPTLLFPWTLSPGIGSPYPFLRELKSEERGLCLIHLLLACASHVAAGHMEYANIGLEHISQLASPDGDTMQRIAAYFTEALADRVLKAWPGLHKALNSTKISSVSEQIFVQRLFFEICPFFKLAYLITNQAIVEAMKGEKMIHIIDFNSFEPAQWINLLQTLKERPEGPPHVRITGIHEQKEVLEQMAIRLNDEAEKLDIPFQFISIVSRLENLDFESLRVKTGEALAVSSVLELHSLLANDEERKSSPSTSTNIQKILHVKQRTLGEWFETDSMPLFSSPDSASTSSPLSLSPSQKMGSFLNALWGLSPKIMVITEQESNLNGCTFMERVREALNFYAALFDCLESTVSRSSLERQKVEKMLFGEEIKNIIACEGAERKERHEKLEKWILRLEVAGFGRVPLSYHGRLLAGKLLQNYGYDGYKIKEENGYLFICWQDRPLFSVSAWSLRRND 469
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 19311839 19313248 + Bpe001891.1 Bpe15g00970 116649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g00970 469 PANTHER TRANSCRIPTION FACTOR GRAS, SCARECROW-LIKE PROTEIN 3-RELATED 3 466 - -
Bpe15g00970 469 ProSiteProfiles GRAS family profile. 40 464 IPR005202 -
Bpe15g00970 469 Pfam GRAS domain family 49 463 IPR005202 -
Bpe15g00970 469 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 3 466 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g00930 Bpe-Chr11:6880929 Bpe15g00970 Bpe-Chr15:19311839 0 dispersed
Bpe15g00970 Bpe-Chr15:19311839 Bpe11g01481 Bpe-Chr11:11017199 8.97E-79 dispersed
Bpe15g00970 Bpe-Chr15:19311839 Bpe02g02000 Bpe-Chr2:21717752 1.30E-70 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22643 PF03514 GRAS 5.90E-135 CL0063 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g00970 - - cmo:103489486 746.888