Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g00992 ATGGCTGATGGAAGTCCGAGGACTGATATATCTACCGATGTGGAAACAGACGACAAAAATCTGATGGTCGAAAGAGGTCAATCGAATGCTGTTGTGGCATTTGATTCTAGCGACAGATCAAATGATAGAAGCGATCAGAAGACTCTACGTAGGCTTGCACAAAATCGTGAGGCGGCTAGAAAAAGTCGACTGAGGAAAAAAGCATATGTTCAACAGTTGGAGAGCAGTCGTTTGAAGCTCACCCAACTTGAACAGGAGCTTCAGCGTGCACGACAACAGGGAATATTCATATCCAGTTCAGGAGATCAAGCCCATTCTATGAGTGGAAATGGAGCGATGGCTTTTGACGTGGAATATGGGCGGTGGCTTGAAGAACAAAATCGACAAATTAATGAACTGAGATCTGCAGTCAATTCTCACGCAAGTGAAACAGAACTTCGAATCATCGTTGATGGTGTAATGGCGCATTATGAAGAGATTTTCAAGCTGAAGGGCACTGCAGCAAAGGCTGATGTTTTCCATTTATTGTCTGGCATGTGGAAAACACCGGCCGAAAGGTGTTTCCTGTGGTTGGGTGGTTTCCGGTCATCTGAGCTTCTTAAGCTTCTTGCGAATCAATTGGAGCCTCTGGCGGAGCAGCAATTGGCAAACATTACCAACTTGCAGCAGTCGTCGCAGCAGGCTGAAGATGCATTATCACAGGGCATGGATGCATTGCAACAGTCCCTATCAGAGACATTGTCCAGTGGCTCTCTTGGCTCCTCGGGATCATCTGGCAATGTGGCCAATTACATGGGTCAAATGGCTATGGCCATGGGTAAACTAGGCACTCTCGAGGGATTTATTCACCAGGCTGATAATTTGCGGCTACAAACACTCCAACAAATGATTCGGATATTGACAATTCGGCAGTCTGCACGAGCACTTCTTGCAATACACGATTACTTCTCCAGATTGCGTGCTCTTAGTTCCCTCTGGCTTGCCAGGCCTAGAGAGTAG 999 46.65 MADGSPRTDISTDVETDDKNLMVERGQSNAVVAFDSSDRSNDRSDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSSGDQAHSMSGNGAMAFDVEYGRWLEEQNRQINELRSAVNSHASETELRIIVDGVMAHYEEIFKLKGTAAKADVFHLLSGMWKTPAERCFLWLGGFRSSELLKLLANQLEPLAEQQLANITNLQQSSQQAEDALSQGMDALQQSLSETLSSGSLGSSGSSGNVANYMGQMAMAMGKLGTLEGFIHQADNLRLQTLQQMIRILTIRQSARALLAIHDYFSRLRALSSLWLARPRE 332
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 19459390 19461686 + Bpe001908.1 Bpe15g00992 116671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g00992 332 SUPERFAMILY Leucine zipper domain 47 90 IPR046347 GO:0003700|GO:0006355
Bpe15g00992 332 Gene3D - 46 98 - -
Bpe15g00992 332 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 45 89 IPR004827 GO:0003700|GO:0006355
Bpe15g00992 332 MobiDBLite consensus disorder prediction 1 48 - -
Bpe15g00992 332 Pfam Seed dormancy control 129 204 IPR025422 GO:0006351|GO:0043565
Bpe15g00992 332 Coils Coil 211 231 - -
Bpe15g00992 332 ProSiteProfiles DOG1 domain profile. 112 329 IPR025422 GO:0006351|GO:0043565
Bpe15g00992 332 PANTHER TRANSCRIPTION FACTOR TGA9 1 332 - -
Bpe15g00992 332 SMART brlzneu 43 106 IPR004827 GO:0003700|GO:0006355
Bpe15g00992 332 Pfam bZIP transcription factor 47 87 IPR004827 GO:0003700|GO:0006355
Bpe15g00992 332 PANTHER TRANSCRIPTION FACTOR TGA2.3-LIKE ISOFORM X1 1 332 - -
Bpe15g00992 332 Coils Coil 123 143 - -
Bpe15g00992 332 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 50 65 IPR004827 GO:0003700|GO:0006355
Bpe15g00992 332 Coils Coil 66 93 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g01087 Bpe-Chr3:30033852 Bpe15g00992 Bpe-Chr15:19459390 4.10E-179 dispersed
Bpe10g00279 Bpe-Chr10:10131597 Bpe15g00992 Bpe-Chr15:19459390 1.34E-07 dispersed
Bpe10g00943 Bpe-Chr10:14979149 Bpe15g00992 Bpe-Chr15:19459390 9.71E-155 dispersed
Bpe11g00859 Bpe-Chr11:6359184 Bpe15g00992 Bpe-Chr15:19459390 5.20E-105 dispersed
Bpe15g00444 Bpe-Chr15:15907624 Bpe15g00992 Bpe-Chr15:19459390 5.81E-99 dispersed
Bpe15g00992 Bpe-Chr15:19459390 Bpe04g01381 Bpe-Chr4:20448925 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22646 PF14144 DOG1 1.30E-32 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g00992 K14431 - zju:107428714 534.258