Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g01004 ATGGAGAAGCTTAGATGCTGTAACGGCTTCCTGGAAAACTCTAAACCCTACTTTGCTATGATCTCTCTGCAATTTGGATACGCCGGAATGAATATAATCACCAAAGTTTCTCTGAACAGAGGGATGAGTCATTATGTTCTTGTCGTCTACCGCCATGCCTTCGCCACTCTGGCCATAGCTCCCTTTGTTCTTTTCTTCGAGAGGAGGGGGCAGCCGAAAATAACATTGAAAGTTTTCATGCAGATATTCGTTCTTGCTCTACTTGGGCCTGTCATTGATCAAAACTTCTACTACGCCGGTCTGAAGTACACTTCGCCGACTTTTTCGTGTGCTATGAGCAACATGCTACCAGCAATGACATTTGTCATGGCAGTGATATTTAGTAGGATGGAGAAGGTGAATATAAGAAAGGTTAGATGCCAAGCGAAAATAGCTGGAACTTTGGTGACGGTGGCCGGAGCTATGTTGATGACCTTATACAAAGGAAATATTGTAGAGATGCCTTGGTCGAAGCATGTTCATCCGAGATATGCTTCTGAGAGTACCGAATCAAGCAGCAAGGACTGGTTCAAAGGCTCCATTTTCGTCATCATTGCTACACTTGCTTGGTCTTCTCTCTTTGTTTTACAGAACCAAGCTTTGAAGACGTACAAGAATCATCAATTCTCTCTCACTGCGTTGGTGTGCTTTGTCGGGACTTTACAAGCTATTGCTGTGACTTTTGTGATGGAACATAAATCCTCTGTTTGGAGAATTGGCTGGGACATGAACCTCCTTGCTGCTGCCTATGCTGGTATTGTAACTTCAAGTCTGTCTTATTACATCCAAGGGTTGGTAATGAGAAAAAGAGGTCCAGTTTTTGCAACTGCTTTCAGCCCTCTGATGATGATCATAGTAGCAATCATGGGCTCTTTCATTCTTGCAGAAAAGATCTATCTTGGAGGGGTTCTTGGAGCTATTTTGATAGTGATTGGACTTTACTCTGTTTTGTGGGGAAAACACAAAGAAAAGAACTCAGACAGCAAAGAGGAAGACGAAATTCCAGAGGCAATAAAGGGTCCTCATACAAATGGAAATGTGATTTCCATCATAGAAATGGAAGCCAACCAAGTCCAAATGGAAAAAAAAAAAGAAGCTAACAAACTATCTTCCATGGCTATCAGCATTCCTAGTTTTCCAGAACCCCCCATGAAAGCAGTTTCCCAAATGCCAAAACCCTAA 1221 42.51 MEKLRCCNGFLENSKPYFAMISLQFGYAGMNIITKVSLNRGMSHYVLVVYRHAFATLAIAPFVLFFERRGQPKITLKVFMQIFVLALLGPVIDQNFYYAGLKYTSPTFSCAMSNMLPAMTFVMAVIFSRMEKVNIRKVRCQAKIAGTLVTVAGAMLMTLYKGNIVEMPWSKHVHPRYASESTESSSKDWFKGSIFVIIATLAWSSLFVLQNQALKTYKNHQFSLTALVCFVGTLQAIAVTFVMEHKSSVWRIGWDMNLLAAAYAGIVTSSLSYYIQGLVMRKRGPVFATAFSPLMMIIVAIMGSFILAEKIYLGGVLGAILIVIGLYSVLWGKHKEKNSDSKEEDEIPEAIKGPHTNGNVISIIEMEANQVQMEKKKEANKLSSMAISIPSFPEPPMKAVSQMPKP 406
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 19548795 19550891 + Bpe001917.1 Bpe15g01004 116683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g01004 406 PANTHER WAT1-RELATED PROTEIN 10 371 IPR030184 GO:0016021|GO:0022857
Bpe15g01004 406 PANTHER WAT1-RELATED PROTEIN 10 371 - -
Bpe15g01004 406 Pfam EamA-like transporter family 16 157 IPR000620 GO:0016020|GO:0016021
Bpe15g01004 406 Pfam EamA-like transporter family 191 330 IPR000620 GO:0016020|GO:0016021
Bpe15g01004 406 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 161 - -
Bpe15g01004 406 SUPERFAMILY Multidrug resistance efflux transporter EmrE 234 336 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00072 Bpe-Chr2:562039 Bpe15g01004 Bpe-Chr15:19548795 7.33E-127 dispersed
Bpe02g00828 Bpe-Chr2:6074033 Bpe15g01004 Bpe-Chr15:19548795 1.38E-117 dispersed
Bpe14g00378 Bpe-Chr14:3578482 Bpe15g01004 Bpe-Chr15:19548795 2.27E-116 dispersed
Bpe15g01004 Bpe-Chr15:19548795 Bpe15g01102 Bpe-Chr15:20171892 6.74E-94 dispersed
Bpe04g00799 Bpe-Chr4:5242708 Bpe15g01004 Bpe-Chr15:19548795 4.08E-87 transposed
Bpe04g01371 Bpe-Chr4:20319330 Bpe15g01004 Bpe-Chr15:19548795 0 transposed
Bpe08g00917 Bpe-Chr8:11610769 Bpe15g01004 Bpe-Chr15:19548795 2.74E-70 transposed
Bpe11g00234 Bpe-Chr11:1567700 Bpe15g01004 Bpe-Chr15:19548795 6.77E-92 transposed
Bpe12g00742 Bpe-Chr12:12952907 Bpe15g01004 Bpe-Chr15:19548795 2.87E-63 transposed
Bpe15g01004 Bpe-Chr15:19548795 Bpe04g01947 Bpe-Chr4:24336689 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g01004 - - dzi:111295021 604.749