Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g01056 ATGGAGCATTCGAGCCGAGAAAATGGCGGAGATGGGCCGACAAGCCTCTGCAAAAGTGCAGACCCGTTGAACTGGGGATCGCTGGCGGAGGGCCTGAGAGGGAGCCATTTGGAGGAGGTGAAGCGGATGGTGGACGAATATCGGAAGGTGGTGGTTCTGCTAGGCGGCGAAACTCTGACGATAGGTCAAGTTACCTCCATTGCCGCCGGGGCGGTGAGGGTGGAGCTGTCGGAGGAGACAAGGGAGAGAGTGAAGGCTAGCAGTGATTGGGTCCTTGAGAGTATGAAACAGGGGACTGATAGCTATGGAGTCACGACTGGTTTTGGTGCAACCTCCCATAGACGGACCAAGGAAGGTGGTGCCCTCCAAAAGGAGCTAATCAGGTTTTTGAATGCTGGAATATTTGGAAACGGGAAAGACGCAAGTCATACATTACCGGAGTCGGTGAGCAGAGCAGCCATGGTAGTGAGGGTAAACACCCTTCTGCAGGGCTACTCCGGCATCAGGTTTGAGATACTGGAAGCCATAGCTAAGCTTCTCAATCACAACATTACTCCCTGCCTTCCTCTCAGAGGAACTATCACCGCTTCTGGAGATTTAGTCCCTCTCTCTTACATTGCAGGTTTATCCATTGTTAGCCACATAATTTTGTGTTTCTATGTCTTCTCTTGCTCACCTTTTGATCCGGGATCTGCAGGGTTGTTAGTCGGGAGGCCGAACTCGACGGCTGTTGGTCCGAAAGGGGAGTCTCTTAATGCTTCCGAAGCCTTTCGACTGGCCGGCATAGGTGGAGGGTTCTTTGAGCTGCACCCAAAAGAGGGCCTTGCTCTGGTTAATGGCACTGCCGTGGGGTCTGGTTTAGCCTCTACTGTTCTTTTCGAGACCAACATTCTTGCACTTCTTGCCGAGGTTTTGTCGGCAATTTTTGCTGAAGTTATGCAAGGAAAGCCGGAATTTACGGACCATTTGACGCATAGATTGAAGCATCATCCTGGGCAGATTGAAGCTGCAGCCATAATGGAGCACATTTTAGATGGAAGCTCTTACGTCAAATCAGCTCAAAAACTTCATGAGATGGACCCCCTGCAAAAGCCAAAGCAGGATAGATATGCTCTGAGAACATCTCCGCAATGGCTTGGACCTCAAATCGAAGTCATCCGGGTCGCCACCAAAATGATCGAAAGGGAAATCAATTCCGTCAACGATAACCCATTGATCGACGTTTTGAGGAACACGGCTTTACATGGGGGCAATTTCCAAGGTACTTCAATTGGTGTTTCGATGGACAATACTCGCCTAGCCATTGCTTCTATTGGAAAGCTCATGTTTGCCCAATTTTCCGAGCTAGTCAATGACTTTTACAACAATGGCTTGCCTTCAAATCTCTCCGCCAGTCGTAATCCGAGCTTAGACTATGGATTCAAGGGTGCCGAAATAGCCATGGCGTCTTACTGCTCCGAGCTTCAATTCTTGGCCAATCCAGTCACGAATCACGTGCAAAGTGCAGAACAACACAACCAGGATGTGAACTCTCTTGGATTAATTTCTGCAAGAAAAACAGCCGAAGCAGTAGACATATTGAAGCTCATGTCCTCCACTTTCTTAGTGGCATTATGTCAAGCAGTTGATCTGCGTCATTTGGAGGAAAACCTAAAGAACGCAGTGAAAAACACAGTCGGCCAAGTATCAAAGAAGGTCTTAGTAATGGAATTAAATGGAGGACTCCACCCCATCAGATTCAGCAAAAAAGATTTACTCAAAGTGGTAGACAGAGAACACGTATTCTCGTACATCGACGACACATGCAGCGCCACATACCCATTGATTCAAAAACTCAGACAAGTTCTGGTAGACCATGCGCTCAGCAACGGCGACAGAGAGCGAAATCCAAGCACGTCCATATTCCAGAAAATCGGAGCTTTCGAGGCAGAACTGAAAACCCTGTTGCCTAGAGAAGTGGAAAACGCGAGGAAAGAGTACGAAAATGGAAACCCGGGAATTAAAAACCAGATTAAGGAGTGCAGATCATACCCATTGTACAGGTGGGCGAGAGAAACAGTGGGGACAAAACTTCTGACCGGAGAGGAAGTTCGATCTCCGGGTGAAGAATTTGAGAAAGTATTCTGTGCAATCTGTGATGGGAAACTGATTGATCCATTGCTCGAGTGTTTGAAAGACTGGAATGGCGCTCCTCTTCCTATTTGCTAA 2208 48.14 MEHSSRENGGDGPTSLCKSADPLNWGSLAEGLRGSHLEEVKRMVDEYRKVVVLLGGETLTIGQVTSIAAGAVRVELSEETRERVKASSDWVLESMKQGTDSYGVTTGFGATSHRRTKEGGALQKELIRFLNAGIFGNGKDASHTLPESVSRAAMVVRVNTLLQGYSGIRFEILEAIAKLLNHNITPCLPLRGTITASGDLVPLSYIAGLSIVSHIILCFYVFSCSPFDPGSAGLLVGRPNSTAVGPKGESLNASEAFRLAGIGGGFFELHPKEGLALVNGTAVGSGLASTVLFETNILALLAEVLSAIFAEVMQGKPEFTDHLTHRLKHHPGQIEAAAIMEHILDGSSYVKSAQKLHEMDPLQKPKQDRYALRTSPQWLGPQIEVIRVATKMIEREINSVNDNPLIDVLRNTALHGGNFQGTSIGVSMDNTRLAIASIGKLMFAQFSELVNDFYNNGLPSNLSASRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISARKTAEAVDILKLMSSTFLVALCQAVDLRHLEENLKNAVKNTVGQVSKKVLVMELNGGLHPIRFSKKDLLKVVDREHVFSYIDDTCSATYPLIQKLRQVLVDHALSNGDRERNPSTSIFQKIGAFEAELKTLLPREVENARKEYENGNPGIKNQIKECRSYPLYRWARETVGTKLLTGEEVRSPGEEFEKVFCAICDGKLIDPLLECLKDWNGAPLPIC 735
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 19846154 19848911 - Bpe001967.1 Bpe15g01056 116735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g01056 735 Gene3D Fumarase/aspartase (Central domain) 282 730 - -
Bpe15g01056 735 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 192 208 IPR022313 GO:0016841
Bpe15g01056 735 PANTHER PHENYLALANINE AMMONIA-LYASE 1-LIKE 232 735 - -
Bpe15g01056 735 MobiDBLite consensus disorder prediction 1 20 - -
Bpe15g01056 735 PANTHER HISTIDINE AMMONIA-LYASE 232 735 IPR001106 -
Bpe15g01056 735 PANTHER HISTIDINE AMMONIA-LYASE 14 211 IPR001106 -
Bpe15g01056 735 Gene3D - 230 281 IPR024083 -
Bpe15g01056 735 Gene3D - 13 216 IPR024083 -
Bpe15g01056 735 PANTHER PHENYLALANINE AMMONIA-LYASE 1-LIKE 14 211 - -
Bpe15g01056 735 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 232 725 IPR005922 GO:0005737|GO:0006559|GO:0016841
Bpe15g01056 735 CDD PAL-HAL 57 545 IPR001106 -
Bpe15g01056 735 Gene3D - 548 669 IPR023144 -
Bpe15g01056 735 SUPERFAMILY L-aspartase-like 21 735 IPR008948 GO:0003824
Bpe15g01056 735 Pfam Aromatic amino acid lyase 59 557 IPR001106 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe04g01887 Bpe15g01056 CCT
Bpe04g01887 Bpe15g01056 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe15g01056 Bpe-Chr15:19846154 Bpe02g00788 Bpe-Chr2:5696165 0 wgd
Bpe15g01056 Bpe-Chr15:19846154 Bpe04g00695 Bpe-Chr4:4449075 0 wgd
Bpe15g01056 Bpe-Chr15:19846154 Bpe04g01887 Bpe-Chr4:23918844 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g01056 K10775 - cit:102607860 1158.67