Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g01064 CAAAACTTTCATTTATTCTCGTATTCTGAATTAAAAACAGCCACCCATGGCTTCCGATCTTCCAACAAGAGTGGTGCAGGAGGATTCGGCTCCGTCTACAAGGGAAGGCTAGAGGATGGAAGAATTATAGGAGTGAAGGTATTATCAATGGAGTCAAAGCAAGGAGACAGAGAATTCATGTCCGAAATAGCTTCTCTCTCTAATATAAACCATGAGAATCTAGTGAAGCTTCACGGGTGTTGCGTGGACGGTCCTTCAAGAATTCTTGTTTATGAATATATGGAAAACGGCAACCTCGCTCAGACATTTCTCGCCAATAAACAAAGGGCTAAATTTTCGTGGAAGGCGAGGAGGGAAGTTTCAATTGGAATTGCAAAGGGACTTGCTTACATTCATGAGCAAGTTAAACCGCATATTATTCATCGTGATATCAAGCCTGGCAATATACTTTTGGATTGGAATTTCACTCCAAAAATTTCTGATTTTGGACTCTCCAAGCTTTTCCCTGATAATATCAGTCATATTAGCACACGAGTTGCTGGAACTTTAGGTTATCTTGCACCAGAATATGCATTAAGTGGGCATCTAAGAAGAAAATCAGATGTATATAGTTTTGGAGTTCTGCTATTGGAAATAATCACTGGGAAATTACCTGTCGACTTTGACCCTGAACATGGAGAGATTTACCTCGTTCAAACGGCATATGACATGTACAAAGCAGATAAGCTTCTTGATCTAGTGGATCCACTGCTGGAAAACAACTTCTCAGAAAAGGAAGCAATTCGATATCTGAAACTGGGTTTGCTATGTGTCCAGGAGAGACATATTCTCCGACCTCGCATGCCAATGGCCGTCCAGATAATGATTGATGATCAAATCAACATCCACAATCTTGAAATCTCGAAGCCTGGATTAGTCTCTGATATCACAGACGTTAAGGTCAGCAAGAAAAGCCCGTCTAGACACACCATCTCGCTGGCTAGACTGGCTGCTTCAGCCTGGTCGTTCTCCTCGTCATCGTCTTCAACTAGCGGAAGTAGCCCTCTTAGATCTTACAATCTTCGATAA 1068 41.85 QNFHLFSYSELKTATHGFRSSNKSGAGGFGSVYKGRLEDGRIIGVKVLSMESKQGDREFMSEIASLSNINHENLVKLHGCCVDGPSRILVYEYMENGNLAQTFLANKQRAKFSWKARREVSIGIAKGLAYIHEQVKPHIIHRDIKPGNILLDWNFTPKISDFGLSKLFPDNISHISTRVAGTLGYLAPEYALSGHLRRKSDVYSFGVLLLEIITGKLPVDFDPEHGEIYLVQTAYDMYKADKLLDLVDPLLENNFSEKEAIRYLKLGLLCVQERHILRPRMPMAVQIMIDDQINIHNLEISKPGLVSDITDVKVSKKSPSRHTISLARLAASAWSFSSSSSSTSGSSPLRSYNLR 355
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 19911652 19913403 + Bpe001975.1 Bpe15g01064 116743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g01064 355 ProSiteProfiles Protein kinase domain profile. 18 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe15g01064 355 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 42 5 346 - -
Bpe15g01064 355 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 5 346 - -
Bpe15g01064 355 Gene3D Transferase(Phosphotransferase) domain 1 94 300 - -
Bpe15g01064 355 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
Bpe15g01064 355 SMART serkin_6 18 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe15g01064 355 CDD STKc_IRAK 25 288 - -
Bpe15g01064 355 Gene3D Phosphorylase Kinase; domain 1 1 93 - -
Bpe15g01064 355 Pfam Protein kinase domain 21 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe15g01064 355 SUPERFAMILY Protein kinase-like (PK-like) 3 301 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe09g00294 Bpe-Chr9:2347478 Bpe15g01064 Bpe-Chr15:19911652 1.71E-118 dispersed
Bpe15g01064 Bpe-Chr15:19911652 Bpe12g00277 Bpe-Chr12:3049621 6.97E-100 dispersed
Bpe15g01064 Bpe-Chr15:19911652 Bpe04g01581 Bpe-Chr4:22099642 7.36E-145 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63788 PF00069 Pkinase 3.20E-46 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g01064 - - palz:118059970 445.277