Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g01065 ATGGCTTCCAACACGTTAATGAGCTGCGGAATCGCAGCAGTGGCATACCCGTCGGTCCTCTCGTCGTCCAAATCGAAGTTCGCCGCCACATTCGCACTTCCTTCGGGATATGCCAATGCGTCGTCACGCTTCTCCATGTCCGCCGAATGGATGCCCGGCCAACCAAGACCTCCATACCTGGATGGTTCTGCTCCGGGAGATTTTGGGTTTGACCCACTTGGGTTGGGTTCAGTGCCCGAGAATCTGGAGAGGTTCAAAGAGTCTGAACTCATCCATTGCAGATGGGCTATGCTCGCTGTTCCTGGGATCTTGATTCCAGAGGCCTTGGGGTTAGGCAACTGGGTCAAGGCTCAAGAGTGGGCTGCTATTCCGGGAGGACAAGCCACCTATTTGGGGCAGCCAGTTCCTTGGGGCACATTACCTACAATTTTGGTGATTGAGTTCCTTGCTATTTCTTTCGTAGAGCACCAACGGAGCATGGAAAAAGACCCGGAGAAGAAGAAGTACCCTGGAGGTGCATTTGATCCCCTGGGCTTCTCTAAAGACCCTGCAAAGTTCAAGGAATACAAAATCAAAGAGGTTAAAAATGGTCGGCTAGCGCTGTTGGCATTTGTTGGGTTCTGTGTGCAGCAATCAGCATACCCAGGGACAGGGCCATTGGAGAACTTGGCCACTCACTTGGCTGACCCATGGCACAACAACATTGGCGATATCATCATCCCAAGAGGGTTGTAA 735 52.11 MASNTLMSCGIAAVAYPSVLSSSKSKFAATFALPSGYANASSRFSMSAEWMPGQPRPPYLDGSAPGDFGFDPLGLGSVPENLERFKESELIHCRWAMLAVPGILIPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAISFVEHQRSMEKDPEKKKYPGGAFDPLGFSKDPAKFKEYKIKEVKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIIIPRGL 244
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 19919108 19920492 - Bpe001976.1 Bpe15g01065 116744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g01065 244 SUPERFAMILY Chlorophyll a-b binding protein 39 239 - -
Bpe15g01065 244 Pfam Chlorophyll A-B binding protein 57 211 IPR022796 -
Bpe15g01065 244 Gene3D Chlorophyll a/b binding protein domain 51 237 - -
Bpe15g01065 244 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 22 237 IPR001344 GO:0009765|GO:0016020
Bpe15g01065 244 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 6, CHLOROPLASTIC 22 237 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe04g01879 Bpe15g01065 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe12g00541 Bpe-Chr12:11278473 Bpe15g01065 Bpe-Chr15:19919108 2.78E-47 dispersed
Bpe15g01065 Bpe-Chr15:19919108 Bpe02g00968 Bpe-Chr2:9084368 9.51E-38 dispersed
Bpe02g00914 Bpe-Chr2:7768174 Bpe15g01065 Bpe-Chr15:19919108 1.69E-42 transposed
Bpe03g01003 Bpe-Chr3:29538794 Bpe15g01065 Bpe-Chr15:19919108 9.47E-42 transposed
Bpe15g01065 Bpe-Chr15:19919108 Bpe03g01097 Bpe-Chr3:30131429 1.20E-44 wgd
Bpe15g01065 Bpe-Chr15:19919108 Bpe04g01879 Bpe-Chr4:23879251 1.03E-175 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g01065 K08907 - pvy:116130060 462.611