Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g01073 ATGGATTCTATTGCCAAAGCACGAATGGCTTCTCCCCCAAGAACACCGATTGGTCTTATTGTTCCGAACCTATCTCCATATTCTCCATCTTCTTCTTCTTCACCGCCTGCCTTTTCTTCACCAGTCTCTCGGTCGAGCAATATTCTGCCGCCAGCGTCTACTCCGGCCGTCGTACTCAGCCCATGTGCTGCGTGCAAAATTCTTCGGCGGCGATGCGTGGACAAGTGCGTTTTAGCGCCGTATTTTCCTCCATCTGAACCTCTCAAGTTCACCATAGCTCATAGAGTCTTTGGAGCAAGCAATATAATCAAGTTATTGCAGGCATATATTCTTTTTTCCTTCAATTCATTTTTACAGGAACTTCCAGAGGATCAAAGAGCCGATGCAGTGAGCAGTATGGTGTACGAGGCAAACGCGAGAATCAGAGACCCGGTGTACGGAAGCGCCGGCGCCATTTGCCACCTCCAGAAGCAAGTGAGCGATCTTCAGACCCAGCTGGCCAGAGCTCGGGCCGACCTACTCAACATGCAGCTGCAGCAGAGTAATCTCATCGACTTGTTCTGCGTCGAAATGGGCCACACATTGGAGGAGAACCAAACTCCGTCGCCATTTTCACACCTCCATCAGAACTGCCCCGGCACTACGCCTTTTCTCAATGATCCCTCCAACTGGGGGCCTCTTTGGACATAA 690 50.72 MDSIAKARMASPPRTPIGLIVPNLSPYSPSSSSSPPAFSSPVSRSSNILPPASTPAVVLSPCAACKILRRRCVDKCVLAPYFPPSEPLKFTIAHRVFGASNIIKLLQAYILFSFNSFLQELPEDQRADAVSSMVYEANARIRDPVYGSAGAICHLQKQVSDLQTQLARARADLLNMQLQQSNLIDLFCVEMGHTLEENQTPSPFSHLHQNCPGTTPFLNDPSNWGPLWT 229
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 19963663 19964852 - Bpe001984.2 Bpe15g01073 116752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g01073 229 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 44 228 - -
Bpe15g01073 229 ProSiteProfiles LOB domain profile. 60 173 IPR004883 -
Bpe15g01073 229 Coils Coil 159 179 - -
Bpe15g01073 229 Pfam Lateral organ boundaries (LOB) domain 61 170 IPR004883 -
Bpe15g01073 229 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 44 228 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe15g01073 Bpe-Chr15:19963663 Bpe15g01174 Bpe-Chr15:20604486 8.81E-47 dispersed
Bpe11g00799 Bpe-Chr11:5972106 Bpe15g01073 Bpe-Chr15:19963663 5.49E-70 wgd
Bpe15g01073 Bpe-Chr15:19963663 Bpe04g01869 Bpe-Chr4:23824443 2.50E-89 wgd
Bpe15g01073 Bpe-Chr15:19963663 Bpe08g01337 Bpe-Chr8:14548087 1.51E-70 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22652 PF03195 LOB 1.80E-35 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g01073 - - lang:109337699 236.884