Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g01076 ATGGCGGAGGCTCCGACGAGTCCAGCTCGTGGGAGCCACGAGAATGGCGGCGAGCAGAGTTCGAGAACCGGAGTGCGAGAGCAAGACCGATATCTTCCTATCGCTAACATTAGCAGGATCATGAAGAAGGCGTTGCCTGCCAACGGCAAAATTGCCAAAGATGCCAAGGATACAGCATATTTGCAATGTGCAATTCTTTGTGTAGGTTTCCGAAATTCAATTACTCCTCGATGTTTTTATTTTGCTGTTTTTTTTTTTTTTACTTGCGAATGTCAATCGTTTAGGGCCAGCGATAAATGCCAGAAAGAGAAGAGGAAGACAATCAATGGTGACGATTTGTTGTGGGCAATGGCAACGTTAGGATTTGAGGACTGTATCGATGCGCTTAAGGTGTATCTAAATAGGTATAGAGAGGGTGATGCTAAAGGGTTTGCCAGAGGTGGTGATGACTCTTCTAAACGAGATGCAGTTGGCGTCCTCCCAAACACACAGGTTTAG 498 45.98 MAEAPTSPARGSHENGGEQSSRTGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTAYLQCAILCVGFRNSITPRCFYFAVFFFFTCECQSFRASDKCQKEKRKTINGDDLLWAMATLGFEDCIDALKVYLNRYREGDAKGFARGGDDSSKRDAVGVLPNTQV 165
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 19984528 19985739 - Bpe001987.1 Bpe15g01076 116755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g01076 165 PRINTS CCAAT-binding transcription factor subunit A signature 119 137 - -
Bpe15g01076 165 PRINTS CCAAT-binding transcription factor subunit A signature 100 118 - -
Bpe15g01076 165 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-2-RELATED 1 64 - -
Bpe15g01076 165 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 1 64 IPR027113 GO:0001228|GO:0006355|GO:0016602
Bpe15g01076 165 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 95 164 IPR027113 GO:0001228|GO:0006355|GO:0016602
Bpe15g01076 165 MobiDBLite consensus disorder prediction 1 25 - -
Bpe15g01076 165 Gene3D Histone, subunit A 18 157 IPR009072 GO:0046982
Bpe15g01076 165 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-2-RELATED 95 164 - -
Bpe15g01076 165 SUPERFAMILY Histone-fold 28 142 IPR009072 GO:0046982
Bpe15g01076 165 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 31 59 IPR003958 -
Bpe15g01076 165 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 95 117 IPR003958 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe04g01683 Bpe15g01076 CCT
Bpe04g01683 Bpe15g01076 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe15g01076 Bpe-Chr15:19984528 Bpe07g00646 Bpe-Chr7:13218659 3.67E-38 dispersed
Bpe15g01076 Bpe-Chr15:19984528 Bpe04g01683 Bpe-Chr4:22804541 3.49E-64 wgd
Bpe15g01076 Bpe-Chr15:19984528 Bpe04g00707 Bpe-Chr4:4554977 1.00E-50 wgd
Bpe15g01076 Bpe-Chr15:19984528 Bpe04g01866 Bpe-Chr4:23814893 1.14E-72 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g01076 K08065 - pop:7489621 204.912