Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g01082 ATGAGTTGGTTCATCTGTTCAGGAAATTCAAAGAAAAACGGAAAAAAGAAGCAGAAAAAGAAGCCAAGAGATCAGATCTCATCTACTTCAGATAAGTTTTCAGTGAATACTTCATTTAATGTGAAGGAGGGCCCAAAAGATGGAAGATCTGATCATATTTCAGCACAAACATTTACATTTCGTGAATTGGCTGCTGCAACAAAAAACTTCCGAGCAGATTGTCTTGTGGGTGAAGGAGGTTTTGGTCGAGTATATAAAGGGCGGCTGGAAAGTATAAATCAGGCTGTTGCCATCAAACAACTTGATCGAAATGGGCTGCAAGGGAACAGGGAATTCCTTGTTGAAGTGCTGATGTTGAGCCTGCTTCATCACCAAAATCTTGTTAACCTAATTGGTTATTGTGCTGATGGGGATCAAAGACTCTTGGTGTATGAATACATGCCATTGGGATCTTTGGAAGACCATCTACACGATATTCCACCCGATAAAAAAAGACTAGACTGGAATACACGAATGAGGATAGCAGCAGGTGCTTCAAAGGGCTTGGAGTATTTACATGACAAAGCCAATCCTCCTGTTATATATCGTGATTTGAAATGTTCAAACATTTTGCTTGGAGAAAGCTATCATCCAAAGCTATCCGATTTTGGCCTTGCGAAACTGGGTCCAGTGGGAGATAAAACTCATGTGTCCACCCGAGTGATGGGAACTTATGGATATTGTGCACCAGAATATGCAATGACTGGTCAGCTCACCTTAAAATCAGATGTTTATAGCTTTGGAGTTGTTCTTCTTGAAATAATAACTGGCAGAAAAGCAATTGACAATTTAAGAGCTGCTGGGGAGATCAATTTGGTCGCTTGGGCCCGGCCTTTGTTTAAAGATCGAAGGAAATTTTCACAGATGGCCGATCCATTGCTTCAAGGACAGTACCCAGTTAGGGGATTATATCAAGCTCTTGCAGTTGCTGCTATGTGTGTTCAAGAACAACCAAACATGCGACCTCTAATAGCTGACGTTGTCACTGCTCTATCTTATCTGGCTTCTCAGAAATACGATCCAGACACCCAGCCAGTTCATACTTCGCGAACAGGGTCGTCCACCCCACGTTCTAGACGAGAATTGTAA 1128 42.02 MSWFICSGNSKKNGKKKQKKKPRDQISSTSDKFSVNTSFNVKEGPKDGRSDHISAQTFTFRELAAATKNFRADCLVGEGGFGRVYKGRLESINQAVAIKQLDRNGLQGNREFLVEVLMLSLLHHQNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDIPPDKKRLDWNTRMRIAAGASKGLEYLHDKANPPVIYRDLKCSNILLGESYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNLRAAGEINLVAWARPLFKDRRKFSQMADPLLQGQYPVRGLYQALAVAAMCVQEQPNMRPLIADVVTALSYLASQKYDPDTQPVHTSRTGSSTPRSRREL 375
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 20012053 20021306 - Bpe001993.1 Bpe15g01082 116761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g01082 375 ProSiteProfiles Protein kinase domain profile. 70 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe15g01082 375 MobiDBLite consensus disorder prediction 28 43 - -
Bpe15g01082 375 SUPERFAMILY Protein kinase-like (PK-like) 56 359 IPR011009 -
Bpe15g01082 375 ProSitePatterns Serine/Threonine protein kinases active-site signature. 193 205 IPR008271 GO:0004672|GO:0006468
Bpe15g01082 375 Gene3D Phosphorylase Kinase; domain 1 41 146 - -
Bpe15g01082 375 Pfam Protein tyrosine and serine/threonine kinase 75 290 IPR001245 GO:0004672|GO:0006468
Bpe15g01082 375 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL27 11 374 - -
Bpe15g01082 375 ProSitePatterns Protein kinases ATP-binding region signature. 76 99 IPR017441 GO:0005524
Bpe15g01082 375 MobiDBLite consensus disorder prediction 1 50 - -
Bpe15g01082 375 PANTHER OS07G0668900 PROTEIN 11 374 - -
Bpe15g01082 375 Gene3D Transferase(Phosphotransferase) domain 1 147 364 - -
Bpe15g01082 375 MobiDBLite consensus disorder prediction 353 375 - -
Bpe15g01082 375 CDD STKc_IRAK 76 344 - -
Bpe15g01082 375 SMART serkin_6 70 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00282 Bpe-Chr4:1809372 Bpe15g01082 Bpe-Chr15:20012053 5.76E-162 transposed
Bpe04g00871 Bpe-Chr4:5800940 Bpe15g01082 Bpe-Chr15:20012053 0 transposed
Bpe04g01126 Bpe-Chr4:9758205 Bpe15g01082 Bpe-Chr15:20012053 0 transposed
Bpe14g01144 Bpe-Chr14:8547672 Bpe15g01082 Bpe-Chr15:20012053 0 transposed
Bpe01g00159 Bpe-Chr1:924750 Bpe15g01082 Bpe-Chr15:20012053 0 wgd
Bpe15g01082 Bpe-Chr15:20012053 Bpe02g00809 Bpe-Chr2:5954976 0 wgd
Bpe15g01082 Bpe-Chr15:20012053 Bpe08g01344 Bpe-Chr8:14594817 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63789 PF07714 PK_Tyr_Ser-Thr 4.80E-45 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g01082 - - rcu:8264792 654.825