Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g01102 ATGGCATGGTTCAGGACTAGTTCTGCCATAGCAAAGCTTGCCATTAAGAGAACTTTAGCCCAGGGAGGATCCTATGTCACTAGATCAAGGATCATCCAGTCTCACAATCGATGTTTTCACACCACAGTATTTAAGTCAAAGGCACAAGCAGCTCCAGTCCCCCGCCCAGTGCCCCTTTCTAGGCTTACTGATAGCTTCTTAGATGGGACAAGCAGTGTCTACCTAGAAGAACTTCAAAGGGCATGGGAAGAGGACCCTAATAGTGTTGATGAGTCATGGGACAATTTTTTTAGAAATTTTGTCGGTCAGGCTGCAACATCACCTGGCATTTCAGGCCAAACAATTCAAGAGAGCATGCGGTTGCTGTTGCTTGTTAGGGCATATCAAGTCAATGGGCACATGAAAGCAAATTTGGACCCTTTGGGCTTAGAGGAACGCCAAATCCCTGATGATTTGGATCCTGCTCTTTATGGATTCACAGATGCTGATCTTGATAGAGAGTTCTTTTTAGGGGTGTGGAGGATGTCTGGGTTTTTGTCTGAGAACCGCCCAGTACAGACCCTAAGATCCATATTAACTCGACTTGAGCAGGCATACTGTGGGAGCATCGGATTTGAATACATGCACATCGCAGATCGAGATAAATGTAACTGGTTGAGGGACAAGATTGAAACCCCTACACCTATGCAATACAATAGGCAACGTCGAGAGGTTATTCTTGATCGTCTAATATGGAGTACACAATTTGAAAATTTCTTAGCCACAAAATGGACAACAGCAAAAAGGTTTGGGCTTGAAGGCGGAGAGACATTAATTCCGGGCATGAAGGAAATGTTTGATAGGTCTGCAGATCTTGGAGTTGAGAACATTGTTATTGGAATGCCTCATCGAGGAAGGTTAAATGTTTTGGGAAATGTTGTTCGAAAGCCTCTGCGTCAAATTTTTAGTGAGTTTAGCGGTGGTACAAAACCTGTGGATGAAGTTGGGCTCTACACTGGAACTGGGGATGTCAAGTACCACTTGGGTACTTCATATGATAGGCCAACTAGAGGTGGCAAGAGAATACATCTCTCTCTGGTTGCAAATCCAAGTCACTTGGAAGCTGTCGATCCGGTTGTTGTGGGGAAAACTAGGGCAAAACAATACTACTCAAATGACTTGAATAGGACAAAAAATATGGGTATTTTGATACATGGAGATGGTAGCTTTGCCGGACAAGGTGTTGTATATGAAACCCTTCATCTTAGTGCTCTTCCAAACTACACCACTGGTGGAACTATTCATATTGTGGTGAACAATCAAGTGGCCTTCACAACTGATCCAATGTCAGGGAGATCTTCACAGTACTGCACGGATGTTGCTAAAGCATTGGATGCCCCAATATTTCATGTAAATGGGGATGATATGGAGGCAGTTGTTCACGTCTGTGAGCTTGCTGCCGAGTGGAGGCAGACATTTCATTCAGATGTTGTTGTTGATTTGGTCTGCTATCGTCGATTTGGGCACAATGAGATCGATGAGCCATCATTCACTCAGCCCAAGATGTATAAGGTCATTAGGAATCATCCTTCAGCTCTTCAAATCTACCAAAAGAAGCTCTTGGAGTCTGGGCAGGTGACCCAAGAGGATATTGATAGGATACAGAATAAGGTCAATGCAATCCTGAACGAAGAATTCTTGGCCAGCAAAGATTATGTCCCCAAAAGAAGGGACTGGCTTTCAGCCTATTGGTCTGGATTTAAGTCACCCGAACAGCTTTCACGAGTTCGAAATACGGGGGTTAAACCAGAGATCTTGAAGAATGTGGGTAAAGCAATTACGGTTCTTCCAGATACTTTTAAGCCTCACAGAGCAGTAAAAAAGGTTTATGAACAGAGAGCACAAATGATTGAATCAGGGGAGGGGATTGATTGGGCAGTTGGAGAGGCACTTGCTTTTGCCACTTTACTAGTGGAAGGTAATCATGTTAGATTGAGTGGCCAGGATGTTGAAAGAGGTACATTTAGTCATCGGCATTCTGTTATTCACGATCAAGAAACCGGGGAGAAATATTGCCCTCTAGATCACGTTATCATGAATCAAGACGAGGAAATGTTTACTGTTAGCAACAGTTCACTTTCGGAGTTTGGTGTTCTTGGATTTGAGTTGGGTTACTCAATGGAAAATCCAAATTCATTGGTAATTTGGGAAGCTCAGTTTGGTGATTTTGCAAATGGGGCACAAGTTGTATTTGATCAGTTCGTGTGCAGTGGGGAATCAAAGTGGTTGCGACAAACTGGGCTTGTCGTTTTGCTTCCACATGGTTATGATGGGCAGGGCCCTGAACATTCCAGTGCGCGATTGGAGCGTTTTCTTCAGATGAGTGATGACAATCCTTTTGTTATCCCTGAGATGGAGCCAACTCTTAGAAAGCAAATTCAGGAATCCAACTGGCAAGTTGTGAATGTTACAACTCCTGCGAACTATTTCCATGTCTTGCGACGTCAGATACACAGGGAATTTCGAAAGCCTTTAATTGTGATGGCTCCCAAAAACCTGCTGCGTCACAAGGATTGTAGATCAAATCTATCTGAGTTTGATGACGTTGAAGGGCACCCAGGTTTTGACAAACAGGGAACCAGATTCAAACGTCTCATCAAGGATCAGAATGATCATTCTGATCGTGAAGAGGGCATCAGACGTTTAATACTCTGCTCTGGAAAGATTTATTATGAGCTTGATGAGGAGAGGAAAAAGGTTGATGGAAAGGACGTTGCAATATGCAGGGTCGAACAGCTTTGTCCCTTCCCGTATGATCTCATCCAAAGAGAGCTAAATCGATATCCAAATGCTGAGGTTGTTTGGTGCCAAGAAGAGCCTATGAACATGGGAGCTTATAGCTATATCTATCCTCGGCTAGGCACGGCCATGAAAGCACTAGGTAGAGGAACAATAGAAGACGTGAAGTACATTGGCCGTGCTCCATCAGCCGCCACTGCTACTGGTTTCTATCAAGCTCATGTCAAAGAACAAACTGAGCTTCCATTTCTGGCTGTGATTTTGTTGCAGTTTGGGTTTGCAGGAATGTCCATTATTAGTAAGTGTGCTTTAAACCAAGGAATGAGTCAACATGTCTTGGTCGTTTATCGTAACGCTGTTGCCACCTTTGTGTTTGCTCCATTCGCCCTTGTACTTGAAAGGAAAATAAGGCCAAAGATGACGTATTCCATCCTTTTGAAGATCTTGTTGCTGGGTTTGTTGGAGCCAGTGATCGATCAGAATTTGTATTACACTGGTATGAAGTATACAACAGCAACTTTCACAGCTGCCATGACCAATGTTCTTCCTGCTTTTGCATTCTTAATGGCTTGGGCTTTGAGGCTTGAGAAGGTTGACATAAGGAGGCTTTACAGCCAGGCAAAGATAATAGGAACTGTAGTGACAGTAGGAGGAGCAATGCTTATGACTTTAATCAGAGGGCCTAATTTGAATCTTCCATGGACAAAGCAAGATCAAAACAATCATAATCACACTTCTAGCGTACCCAACAATCAAGATCCTATCAAAGGTGCTTTAATGATCTCAGCTGGCTGTATTTGCTGGGCTGGTTTTATCATTCTCCAAGCAATTACGCTAAAATCGTACCCGGCAGCGCTTTCATTAACATCCTGGATTTGCTTTATGGGTATGGTAGAAGGATCAGTGCTGGCTTTGGCAATCGAATGGAAGAATCCTGCAGCTTGGTCAATACACTTGGACACTAAACTTTTAACAGCTCTCTACGGCGGGATAGTATGTTCAGGAATGGCATACTATGTCCAAGGAGTGGTGATGAAGAAAAGAGGACCTGTTTTCGTGACAGCCTTCAGCCCACTTTCCATGGTTATTGTTGCAGTAATGGGCTCTTTCATATTGTCTGAGATAGTATACTTGGGAAGGGCAATTGGAGCAATGGTGATAGTGTTTGGATTGTATCTGGTGCTGTGGGGAAAGAGCAAGGATCACCTTCCTTCCAACACGGATGAAGCGGAGAAGGCTTCAAATCAAGAATTTGTAGCCGTTGATGTTGGTAGTGCTGGAAGAGTTTGA 4068 43.66 MAWFRTSSAIAKLAIKRTLAQGGSYVTRSRIIQSHNRCFHTTVFKSKAQAAPVPRPVPLSRLTDSFLDGTSSVYLEELQRAWEEDPNSVDESWDNFFRNFVGQAATSPGISGQTIQESMRLLLLVRAYQVNGHMKANLDPLGLEERQIPDDLDPALYGFTDADLDREFFLGVWRMSGFLSENRPVQTLRSILTRLEQAYCGSIGFEYMHIADRDKCNWLRDKIETPTPMQYNRQRREVILDRLIWSTQFENFLATKWTTAKRFGLEGGETLIPGMKEMFDRSADLGVENIVIGMPHRGRLNVLGNVVRKPLRQIFSEFSGGTKPVDEVGLYTGTGDVKYHLGTSYDRPTRGGKRIHLSLVANPSHLEAVDPVVVGKTRAKQYYSNDLNRTKNMGILIHGDGSFAGQGVVYETLHLSALPNYTTGGTIHIVVNNQVAFTTDPMSGRSSQYCTDVAKALDAPIFHVNGDDMEAVVHVCELAAEWRQTFHSDVVVDLVCYRRFGHNEIDEPSFTQPKMYKVIRNHPSALQIYQKKLLESGQVTQEDIDRIQNKVNAILNEEFLASKDYVPKRRDWLSAYWSGFKSPEQLSRVRNTGVKPEILKNVGKAITVLPDTFKPHRAVKKVYEQRAQMIESGEGIDWAVGEALAFATLLVEGNHVRLSGQDVERGTFSHRHSVIHDQETGEKYCPLDHVIMNQDEEMFTVSNSSLSEFGVLGFELGYSMENPNSLVIWEAQFGDFANGAQVVFDQFVCSGESKWLRQTGLVVLLPHGYDGQGPEHSSARLERFLQMSDDNPFVIPEMEPTLRKQIQESNWQVVNVTTPANYFHVLRRQIHREFRKPLIVMAPKNLLRHKDCRSNLSEFDDVEGHPGFDKQGTRFKRLIKDQNDHSDREEGIRRLILCSGKIYYELDEERKKVDGKDVAICRVEQLCPFPYDLIQRELNRYPNAEVVWCQEEPMNMGAYSYIYPRLGTAMKALGRGTIEDVKYIGRAPSAATATGFYQAHVKEQTELPFLAVILLQFGFAGMSIISKCALNQGMSQHVLVVYRNAVATFVFAPFALVLERKIRPKMTYSILLKILLLGLLEPVIDQNLYYTGMKYTTATFTAAMTNVLPAFAFLMAWALRLEKVDIRRLYSQAKIIGTVVTVGGAMLMTLIRGPNLNLPWTKQDQNNHNHTSSVPNNQDPIKGALMISAGCICWAGFIILQAITLKSYPAALSLTSWICFMGMVEGSVLALAIEWKNPAAWSIHLDTKLLTALYGGIVCSGMAYYVQGVVMKKRGPVFVTAFSPLSMVIVAVMGSFILSEIVYLGRAIGAMVIVFGLYLVLWGKSKDHLPSNTDEAEKASNQEFVAVDVGSAGRV 1355
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 20171892 20181688 - Bpe002014.1 Bpe15g01102 116781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g01102 1355 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 152 581 IPR029061 -
Bpe15g01102 1355 Pfam 2-oxoglutarate dehydrogenase N-terminus 64 102 IPR032106 -
Bpe15g01102 1355 SUPERFAMILY Multidrug resistance efflux transporter EmrE 1042 1150 - -
Bpe15g01102 1355 Pfam 2-oxoglutarate dehydrogenase C-terminal 871 1007 IPR031717 -
Bpe15g01102 1355 Gene3D TPP helical domain 114 201 - -
Bpe15g01102 1355 CDD TPP_E1_OGDC_like 249 516 - -
Bpe15g01102 1355 PANTHER 2-OXOGLUTARATE DEHYDROGENASE, MITOCHONDRIAL-LIKE 1 1007 - -
Bpe15g01102 1355 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 619 855 IPR029061 -
Bpe15g01102 1355 Pfam Dehydrogenase E1 component 244 565 IPR001017 GO:0016624
Bpe15g01102 1355 Pfam Transketolase, pyrimidine binding domain 635 850 IPR005475 -
Bpe15g01102 1355 Gene3D - 592 864 - -
Bpe15g01102 1355 TIGRFAM 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 66 1007 IPR011603 GO:0004591|GO:0006099|GO:0030976
Bpe15g01102 1355 SMART Transket_pyr_3 636 849 IPR005475 -
Bpe15g01102 1355 Gene3D - 867 1012 IPR042179 -
Bpe15g01102 1355 PANTHER 2-OXOGLUTARATE DEHYDROGENASE 1 1007 IPR011603 GO:0004591|GO:0006099|GO:0030976
Bpe15g01102 1355 Gene3D - 202 572 - -
Bpe15g01102 1355 SUPERFAMILY Multidrug resistance efflux transporter EmrE 1245 1326 - -
Bpe15g01102 1355 Pfam EamA-like transporter family 1010 1149 IPR000620 GO:0016020|GO:0016021
Bpe15g01102 1355 Pfam EamA-like transporter family 1182 1321 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01845 Bpe-Chr4:23693176 Bpe15g01102 Bpe-Chr15:20171892 7.47E-177 dispersed
Bpe04g01947 Bpe-Chr4:24336689 Bpe15g01102 Bpe-Chr15:20171892 3.67E-96 dispersed
Bpe15g01004 Bpe-Chr15:19548795 Bpe15g01102 Bpe-Chr15:20171892 6.74E-94 dispersed
Bpe15g01102 Bpe-Chr15:20171892 Bpe02g00828 Bpe-Chr2:6074033 6.21E-138 wgd
Bpe15g01102 Bpe-Chr15:20171892 Bpe04g01844 Bpe-Chr4:23685751 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g01102 K00164 - cpap:110807749 1929.45