Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g01111 ATGGTTTTCTCATCAATACCAGCCTATTTGGATCCACCAAACTGGCAACAGCAAACAAATCAGCAATCTGGAGTTGGCTGTGAAAACACTCCGCCGCCACCTTTACCTGTTACTGGAGGTGGATCCGGTTCGATCAGGCAGAGTTCGATGGCTGATCGTGCCCGTCTAGCCAAGATGCCACAGCCGGAGGCTGCCCTAAAGTGCCCAAGATGCGAATCCACAAACACGAAGTTTTGTTACTACAATAATTACAACTCTTCTCAACCTCGCCATTTTTGCAAGAGCTGCAGGCGATACTGGACGAGAGGTGGTGCCCTGAGGAACGTCCCGGTTGGGGGTGGTAGCAGAAGGAACAAAAGAAGTAAAGCCGGAAATGGATCGAAATCTCCGTTGATGGAGAAGAAAACTGCGTCAAGCTCTACTGCTACAGTCTCTTCAAGTAGCTGCACTTCTGATATGGTTGGCCATTGGATCTCGCCAGAATCTTCGCAGCTGCAACTTTTTCCATTTCATCATTTGAGTGATTATAGTATCGGGAATGTCGGCATGAGTTTCTCCGGAATCCAACCGCCTACTGTTGGCGAAGATAGTGTTAGATTTCCGATCGCTATTGATTCAAGTGGTTGCGCCGGCGGCAGTGACGATCCCATGTTTTCCTGTGCAATTAATGAAAATTGGAGATTACAACAAGTTCAACAATTTCCTTTTCTATCAAATATGGAAAATTCAAATGGGCTATATACGTTGGGGTGTTATAATGAAGGCGGCGCAGAGCGACCCAATTATCAGCTTCATCGCTTTTCGAAGCCCTTAGCTTCTGGGGTTTCTCGTTTGGTTACAGAGAAAATGGAGGAAAATCAAGGGTTTAATCTTCCGAGAAACTTTCTGGGTGTTCAAGGAAATGATCAATTCTGGAGAGGAAACAATGCCTGGAATGACCTTTCTGGTTTCAGTTCATCATCCACCAGCCATCTCTAA 978 46.11 MVFSSIPAYLDPPNWQQQTNQQSGVGCENTPPPPLPVTGGGSGSIRQSSMADRARLAKMPQPEAALKCPRCESTNTKFCYYNNYNSSQPRHFCKSCRRYWTRGGALRNVPVGGGSRRNKRSKAGNGSKSPLMEKKTASSSTATVSSSSCTSDMVGHWISPESSQLQLFPFHHLSDYSIGNVGMSFSGIQPPTVGEDSVRFPIAIDSSGCAGGSDDPMFSCAINENWRLQQVQQFPFLSNMENSNGLYTLGCYNEGGAERPNYQLHRFSKPLASGVSRLVTEKMEENQGFNLPRNFLGVQGNDQFWRGNNAWNDLSGFSSSSTSHL 325
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 20233028 20234130 + Bpe002022.1 Bpe15g01111 116790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g01111 325 MobiDBLite consensus disorder prediction 11 50 - -
Bpe15g01111 325 MobiDBLite consensus disorder prediction 107 148 - -
Bpe15g01111 325 ProSitePatterns Zinc finger Dof-type signature. 68 104 IPR003851 GO:0003677|GO:0006355
Bpe15g01111 325 Pfam Dof domain, zinc finger 65 120 IPR003851 GO:0003677|GO:0006355
Bpe15g01111 325 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 4 322 IPR045174 GO:0003700|GO:0006355
Bpe15g01111 325 PANTHER DOF ZINC FINGER PROTEIN DOF3.6 4 322 - -
Bpe15g01111 325 ProSiteProfiles Zinc finger Dof-type profile. 66 120 IPR003851 GO:0003677|GO:0006355
Bpe15g01111 325 MobiDBLite consensus disorder prediction 131 148 - -
Bpe15g01111 325 MobiDBLite consensus disorder prediction 11 28 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01330 Bpe-Chr4:19894303 Bpe15g01111 Bpe-Chr15:20233028 1.51E-87 dispersed
Bpe15g01111 Bpe-Chr15:20233028 Bpe10g00044 Bpe-Chr10:647821 5.58E-31 dispersed
Bpe15g01111 Bpe-Chr15:20233028 Bpe02g00845 Bpe-Chr2:6257405 5.19E-60 wgd
Bpe15g01111 Bpe-Chr15:20233028 Bpe03g01040 Bpe-Chr3:29734000 4.21E-73 wgd
Bpe15g01111 Bpe-Chr15:20233028 Bpe08g01366 Bpe-Chr8:14735050 7.94E-66 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22654 PF02701 zf-Dof 9.10E-33 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g01111 - - vvi:100258172 352.829