Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g01114 ATGGGGAAGAATGAATTTCTCACGCCTAAAGCGATTGCGAACAGAATCAAGGCCAAAGGTCTTCAGAAGCTCAGATGGTACTGCCAGATGTGTCAGAAGCAATGCCGAGATGAAAACGGCTTTAAATGCCACTGTATGAGCGAGAGTCACCAGCGCCAAATGCAAATCTTTGGTCAAAACCCCTCTCGAATCGTTGATGGATATTCGGAGGAGTTCGAGAGCACTTTTATGGAGCACATGAAACGTAGCCACAGGTTCAGCCGCATCGCCGCTACGGTTGTGTACAACGAATATATCAGTGACAGGCATCATGTTCATATGAATTCGACGCAGTGGGCTACGCTCACTGAGTTCGTCAAGTATTTGGGACGAACTGGGAAATGCAAGGTGGAGGAGACCCCTAAAGGTTGGTTTATTACGTATATAGATAGAGATTCTGAGACTCTTTTTAAGGAAAAGATGAAGAATAAGAGGATTCGAGCCGATTTAGCAGAGGAAGAGAAGCAAGAGAGGGAGATAAAGAAGCAGATTGAGAGGGCTGAGCAGCTGATCCCATTATCTGATGAGACTTCTCAGCCTCTAGATCCAGAAGACGTAAGGGAACTAAAGTTAGAAACTGGGGTTAAGATTGGATTTGCACTTGGGTCTTCCTCTAAATTAAAGGAAAAGGCAGAGAGTTCAAAGTTGATATTCAATGAAGCGGAGAACGAGGGAAGTGGAAGAAGTAAAAATGGTGAGAATTCGCATAAGCATGGCAGCAGCGGTGGTGGTCGATCAGCATTGGAGGAGTTGATGAGAGAGGAAGAAAAGAAAAAGGAGAAAATTAACAGGAAAGATTACTGGTTGTGTGAAGGGATAATTGTTAAGATCATGAGCAAAGCATTGGCAGAGAAGGGATACTATAAACAGAAAGGTGTCGTGAAGAAAGTGATTGACAAATATGTTGGAGAAATCGAAATTCTCAATAATAAGCATGTTCTAAGAGTAGATCAAGAAGAGCTTGAGACTGTGATTCCACAAATCGGCAGTCTTGTGAGAATAGTAAATGGAGCATACCGCGGTTCAAATGCAAAGTTATTGGCAGTCAATATGGATAGGTTCTGTGCCAAGGTGCAGATAGAGAAGGGCGTCTATGATGGCAGAGTTCTAAATGCTGTTGACTATGAAGATATTTGTAAAGTTATCTTGTGA 1191 42.82 MGKNEFLTPKAIANRIKAKGLQKLRWYCQMCQKQCRDENGFKCHCMSESHQRQMQIFGQNPSRIVDGYSEEFESTFMEHMKRSHRFSRIAATVVYNEYISDRHHVHMNSTQWATLTEFVKYLGRTGKCKVEETPKGWFITYIDRDSETLFKEKMKNKRIRADLAEEEKQEREIKKQIERAEQLIPLSDETSQPLDPEDVRELKLETGVKIGFALGSSSKLKEKAESSKLIFNEAENEGSGRSKNGENSHKHGSSGGGRSALEELMREEEKKKEKINRKDYWLCEGIIVKIMSKALAEKGYYKQKGVVKKVIDKYVGEIEILNNKHVLRVDQEELETVIPQIGSLVRIVNGAYRGSNAKLLAVNMDRFCAKVQIEKGVYDGRVLNAVDYEDICKVIL 396
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 20243650 20244840 + Bpe002025.1 Bpe15g01114 116793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g01114 396 SUPERFAMILY beta-beta-alpha zinc fingers 26 62 IPR036236 -
Bpe15g01114 396 Coils Coil 258 278 - -
Bpe15g01114 396 Gene3D - 339 394 IPR014722 -
Bpe15g01114 396 MobiDBLite consensus disorder prediction 232 269 - -
Bpe15g01114 396 Gene3D - 285 338 - -
Bpe15g01114 396 Pfam KN17 SH3-like C-terminal domain 277 330 IPR041330 -
Bpe15g01114 396 Pfam Domain of Kin17 curved DNA-binding protein 52 177 IPR019447 -
Bpe15g01114 396 SMART Kin17_mid_2 52 178 IPR019447 -
Bpe15g01114 396 Gene3D - 60 159 IPR038254 -
Bpe15g01114 396 PANTHER KIN17 KIN, ANTIGENIC DETERMINANT OF RECA PROTEIN HOMOLOG 1 394 IPR037321 -
Bpe15g01114 396 Coils Coil 154 183 - -
Bpe15g01114 396 CDD KOW_KIN17 341 394 IPR041995 -
Bpe15g01114 396 PANTHER BNAA05G13760D PROTEIN 1 394 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g01114 K13102 - zju:107421021 627.861