Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g01146 ATGGAGGGTAAGGAAGAAGACGTAAGATTGGGAGCCAATAAGTTCCCAGAGAGGCAACCCATAGGGACGGCCGCGCAGAGCCAGGATGATACCAAGGACTACAAGGAGCCACCACCGGCTCCGCTTTTTGAGCCCGGCGAGCTAACGTCGTGGTCTTTTTACAGAGCTGGAATCGCAGAGTTCATCGCCACTTTTTTGTTTCTGTACGTCACGATTCTAACCGTGATGGGCGTCGTTCGAACGAAGCTAACTACAGGCAACTTGTGCGGAACTGTCGGAATTCAGGGAATCGCGTGGGCTTTCGGCGGCATGATCTTCGCCCTCGTCTACTGCACTGCCGGAATATCAGGGGGTCATATAAATCCGGCGGTGACGTTCGGGCTGTTTCTGGCGAGGAAGCTTTCGTTAACTCGGGCGATATTCTACATGGTGATGCAGTGTCTTGGAGCGATTTGTGGTGCTGGCGTAGTGAAGGGGTTTCAGCCGAAGTTCTACGAGAATTTGGAAGGCGGAGTCAACCACGTAAACGCTGGCTACACCAAAGGCGACGGCCTTGGCGCAGAGATTGTCGGAACTTTTGTTCTTGTTTACACTGTCTTCTCCGCCACCGATGCCAAACGAAGCGCCAGAGACTCCCATGTTCCTATTTTGGCTCCTCTGCCAATTGGGTTTGCTGTGTTCTTGGTGCACTTAGCAACAATTCCCATAACAGGCACAGGCATAAATCCAGCAAGAAGTTTAGGCGCATCTATAATCTATAACAAAGAGCTAGGCTGGCATGACCATTGGATTTTCTGGGTGGGACCCTTCATTGGTGCTGCTCTTGCAGCTCTTTACCATCAGGTGGTGATCAGAGCCATGCCTTTTAAATCAAAGTGA 879 51.31 MEGKEEDVRLGANKFPERQPIGTAAQSQDDTKDYKEPPPAPLFEPGELTSWSFYRAGIAEFIATFLFLYVTILTVMGVVRTKLTTGNLCGTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYMVMQCLGAICGAGVVKGFQPKFYENLEGGVNHVNAGYTKGDGLGAEIVGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGASIIYNKELGWHDHWIFWVGPFIGAALAALYHQVVIRAMPFKSK 292
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 20424621 20425760 - Bpe002057.1 Bpe15g01146 116825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g01146 292 TIGRFAM MIP: MIP family channel proteins 59 280 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe15g01146 292 Pfam Major intrinsic protein 47 280 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe15g01146 292 PRINTS Major intrinsic protein family signature 223 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe15g01146 292 PRINTS Major intrinsic protein family signature 138 157 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe15g01146 292 PRINTS Major intrinsic protein family signature 263 283 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe15g01146 292 PRINTS Major intrinsic protein family signature 187 205 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe15g01146 292 PRINTS Major intrinsic protein family signature 55 74 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe15g01146 292 PRINTS Major intrinsic protein family signature 101 125 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe15g01146 292 ProSitePatterns MIP family signature. 119 127 IPR022357 -
Bpe15g01146 292 SUPERFAMILY Aquaporin-like 47 285 IPR023271 -
Bpe15g01146 292 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 292 IPR034294 -
Bpe15g01146 292 MobiDBLite consensus disorder prediction 1 39 - -
Bpe15g01146 292 Gene3D Glycerol uptake facilitator protein. 40 291 IPR023271 -
Bpe15g01146 292 PANTHER AQUAPORIN PIP1-4-RELATED 1 292 - -
Bpe15g01146 292 CDD MIP 55 283 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g00661 Bpe-Chr5:20348895 Bpe15g01146 Bpe-Chr15:20424621 5.59E-178 dispersed
Bpe12g00125 Bpe-Chr12:883734 Bpe15g01146 Bpe-Chr15:20424621 9.87E-125 dispersed
Bpe15g00808 Bpe-Chr15:18257018 Bpe15g01146 Bpe-Chr15:20424621 1.77E-122 dispersed
Bpe15g01146 Bpe-Chr15:20424621 Bpe07g00094 Bpe-Chr7:682472 3.15E-179 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g01146 K09872 - csv:101215145 537.339