Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g01148 TATATATTAGCCATGGCAACTACTTATCGAGATCGGACGACGGAGTTTCTATCTTTATCTGAGACGCTGAAGAAGATCGAACCAACCAAAACAGTTGGTCAAGCTGAAAACGAGACCTCTCTTTCTGAATCTTCCCGACCTGTCTCTTCCAAATCAGAATTCAATAGGAAGGCTGCGCAAATTTCTTTCGGAATGCATGAGACCTCTCATCGGATTGCTCGACTTGCGCAATTGGCAAAAAGATCGTCAATGTTTGATGACCCAATTGTGGAAATACAGGAATTAACCGTTTTCATAAAGAACGATATTACAGCTTTGAATGCAGCTCTCTCTGACCTACAAACTATTCAAAACATGGAAATGGCCGATGGGAGCTATTCTGAGGATAAAGTTGTTCACTCGACAGCTGTTTGCGATGACTTGAAAAACAGACTCATGGGGGTCACTAAACATCTTAAAAATGTGTTAACAACAAGAACAGAGAACATAAAAGCAAATGAGAGTAGGAAGCAGATATTCTCCGCAACTGTAACTAAAGAAAATGCTTCTCAAAATCATGCAAAGACAGTGTCTCAGCCACCACCGTGGTTAATTTCATCAAATACATCTGAGAGTTCTCAACCACCAACATTGCCAGTAAATGGAGCCCAAGTTGGTAGTCAACTGAGGAGAAGGTTAGCTGTCGAAAACACTCCATCCCAGCATATGGAAATGTCAATGTTACAGCAGGTTGTTCCAAGACAGGAAAATTATTCAGAGAGTCGTGGGGTTGCTCTTCATAATGTTGAATCTACGATTTCAGAACTCAGTGGAATCTTTACGCATTTGGCGACAATGGTTGCTCATCAAGGGGAACTGGCTATCAGAATTGACGATAACATGGATGAATCGTTGGCTAATGTCGAAGGGGCTCGCAGCTCTCTATTAAGGCATCTCAACCGAATATCGTCAAATAGGTGGCTTATGATCAAAATATTTGGGATAATTATATTTTTTCTAATGGTCTTTATTTTTTTCATGGCTTGA 1026 40.64 YILAMATTYRDRTTEFLSLSETLKKIEPTKTVGQAENETSLSESSRPVSSKSEFNRKAAQISFGMHETSHRIARLAQLAKRSSMFDDPIVEIQELTVFIKNDITALNAALSDLQTIQNMEMADGSYSEDKVVHSTAVCDDLKNRLMGVTKHLKNVLTTRTENIKANESRKQIFSATVTKENASQNHAKTVSQPPPWLISSNTSESSQPPTLPVNGAQVGSQLRRRLAVENTPSQHMEMSMLQQVVPRQENYSESRGVALHNVESTISELSGIFTHLATMVAHQGELAIRIDDNMDESLANVEGARSSLLRHLNRISSNRWLMIKIFGIIIFFLMVFIFFMA 341
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 20432813 20435320 + Bpe002059.1 Bpe15g01148 116827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g01148 341 MobiDBLite consensus disorder prediction 179 215 - -
Bpe15g01148 341 Gene3D - 49 304 - -
Bpe15g01148 341 MobiDBLite consensus disorder prediction 29 53 - -
Bpe15g01148 341 Pfam SNARE domain 286 337 IPR000727 -
Bpe15g01148 341 ProSitePatterns Syntaxin / epimorphin family signature. 255 294 IPR006012 GO:0005484|GO:0006886|GO:0016020
Bpe15g01148 341 PANTHER SYNTAXIN-31 7 340 - -
Bpe15g01148 341 CDD SNARE_syntaxin5 252 340 - -
Bpe15g01148 341 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 249 311 IPR000727 -
Bpe15g01148 341 PANTHER SYNTAXIN 7 340 IPR045242 -
Bpe15g01148 341 Pfam Syntaxin-5 N-terminal, Sly1p-binding domain 7 25 IPR021538 -
Bpe15g01148 341 SMART tSNARE_6 244 311 IPR000727 -
Bpe15g01148 341 SUPERFAMILY t-snare proteins 52 304 IPR010989 GO:0016020|GO:0016192
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe14g00562 Bpe-Chr14:4797051 Bpe15g01148 Bpe-Chr15:20432813 2.61E-93 dispersed
Bpe15g01148 Bpe-Chr15:20432813 Bpe02g01227 Bpe-Chr2:15907745 5.63E-93 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g01148 K08490 - jre:108991917 463.766