Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g01163 ATGGAAGGTAAGTTTCAGAAGTATGTTTCCTCCGAATGCTCTCTTTTGCTTGAATTAGCGGCCTCAGATGATGTAGAATCCTTCAGAAAAGAAGTAGAAGAAAGGGGTTTCAATGTTGACGAACCAAGCCTTTGGTACGGAGGAGTGATTGGACCAAAAAGAATGGGACTTGAGGAGCGGACTCCGCTTATGATTGCGGCCATGTTTGGAAACGCTAAGGTTGTGAATTACATAATCGAAACTGGAAAAGCCGATGTTAATCGAGCTTGTGGTTCCGATGGAGTCACTGCTCTTCACTGTGCTATATCTGGCGGAGTTTCTTCTGTGGACACTGTTAAACTCTTACTCAGTGCATCTTCTGATGTTGATCGACTCAACTCCTACGGACTGAAACCAATCGATTTAATCTGCTTGGATCTTAAATCGCCCACAAATTCAAGAAGGAAGGTGTTGGAGATGTTGCTGAAAGGTGATGATTTGGAAGAAGGTGAATTGAGACTCAAACTAGAAGCAGACAAGCTCAAGATAACAATGCCCCAATTATCCAAAGGATTTGAGAAGAAAGAATTTCCGATTGACATATCGCTGCCAGATATAAACTTTGGACTATATGGTACCGATGATTTTAGGATGTATACTTTCAAGGTGAAGCCTTGTTCAAGGGCATACTCTCATGATTGGACAGAGTGCCCTTTTGTTCATCCTGGTGAAAACGCTCGCCGGAGAGATCCCCGTAAGTATCCATATAGCTGTGTTCCCTGCCCGGATTTTCGTAAAGGAAATTGTGAGAAAGGTGATTCATGTGAATATGCACATGGCGTGTTTGAATCATGGCTTCACCCTGCTCAATATCGAACCCGTCTTTGCAAGGACGAGACTGGATGTGCAAGGAAGGTCTGCTTTTTTGCTCACAAACCTGAAGAATTACGACCTGTGTATGCCTCCACCGGCTCAGCCATGCCCTCTCACCGGCCTCTTTCAGCCAGTGCAATCGATATGGCCATGCTGAGCCCATCAACTCTTGGCGCTTCATCTTTGCCATTGCCTGCCACTTCGACGCCACCATTGTCGCCATTGGCAGCCGCTTCGTCACCCAAAAATGGGATTTTTTGGCAGAACAAATTTAATCTCACGCCTCCTGTTCTTCAGCTTCCTGGCAGTCGCTTAAAAACTGCTATGAGTGCTCGAGATCTTAATTTAGAGATGGAATTTCTCGGGATTAAAACACCTTCCAGCCAACAACAGAATCAGCAGTTAATTGATGAGATATCTCGGCTTTCCTCTCCTACATATTGGAGTAAAGATCGCGGCAGAATTGGAGATCTGAAACCAACTAATCTCGATGATGTATATGGTTCTGGTTCGTTAGAATCGTCCTTGTTGTCTCAATTTGAGGGCCTTCCACTGAATCCGGTGTCCCCTTCTCCATTACACTCTTCCATTGGGCTTCATATGCATCAAAATTTGAACCAACTTCGTTCGAATTACCCAACCAATCTCGCATCTCCATCAATGAGGAAGCCCGCATCTTTTGACCTCGACTCAGGTTCATCGGCGGCAGTTATGAGTTCAAGGTCCACTGCTTTTGCTAAGCGTAGTCAGAGTTTCATTGATCGATCAGCCATCACTCGTCTTCCTGACTTTTTGGGTGCTTCTATATCTTCGGCTAATGTATCTTCCAATCTTTCTGGTTGGGGTTCACCTGATGGAAAGTTGAATTGGGCTGTTAAAGGAGATGAACTCAACAAGTTGAAGAAGTCTGCCTCTTTTGGGATGAGAAACTCTACTACTGGAATAACCAATGCCACCTTGACCACTGCCTCACCTTATGAGCCTGATGTCTCGTGGGTTAATACTTTGGTGAAAGACGTACCTCCTGAGAATCGGCAATTCAACCTTGATGAAGGGATTCATGAGGCACTACCTTATTGGGCGGAGCAGCTGTACATAGAGCAGGAGCAAGTAGTGGCATAA 1974 45.04 MEGKFQKYVSSECSLLLELAASDDVESFRKEVEERGFNVDEPSLWYGGVIGPKRMGLEERTPLMIAAMFGNAKVVNYIIETGKADVNRACGSDGVTALHCAISGGVSSVDTVKLLLSASSDVDRLNSYGLKPIDLICLDLKSPTNSRRKVLEMLLKGDDLEEGELRLKLEADKLKITMPQLSKGFEKKEFPIDISLPDINFGLYGTDDFRMYTFKVKPCSRAYSHDWTECPFVHPGENARRRDPRKYPYSCVPCPDFRKGNCEKGDSCEYAHGVFESWLHPAQYRTRLCKDETGCARKVCFFAHKPEELRPVYASTGSAMPSHRPLSASAIDMAMLSPSTLGASSLPLPATSTPPLSPLAAASSPKNGIFWQNKFNLTPPVLQLPGSRLKTAMSARDLNLEMEFLGIKTPSSQQQNQQLIDEISRLSSPTYWSKDRGRIGDLKPTNLDDVYGSGSLESSLLSQFEGLPLNPVSPSPLHSSIGLHMHQNLNQLRSNYPTNLASPSMRKPASFDLDSGSSAAVMSSRSTAFAKRSQSFIDRSAITRLPDFLGASISSANVSSNLSGWGSPDGKLNWAVKGDELNKLKKSASFGMRNSTTGITNATLTTASPYEPDVSWVNTLVKDVPPENRQFNLDEGIHEALPYWAEQLYIEQEQVVA 657
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 20490445 20492418 + Bpe002074.1 Bpe15g01163 116842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g01163 657 ProSiteProfiles Ankyrin repeat region circular profile. 58 82 - -
Bpe15g01163 657 ProSiteProfiles Ankyrin repeat profile. 93 127 IPR002110 GO:0005515
Bpe15g01163 657 Gene3D - 249 311 - -
Bpe15g01163 657 ProSiteProfiles Zinc finger C3H1-type profile. 248 275 IPR000571 GO:0046872
Bpe15g01163 657 PANTHER UNKEMPT FAMILY MEMBER 7 655 IPR045234 -
Bpe15g01163 657 SMART ANK_2a 93 124 IPR002110 GO:0005515
Bpe15g01163 657 SMART ANK_2a 58 88 IPR002110 GO:0005515
Bpe15g01163 657 Pfam Ankyrin repeats (3 copies) 53 123 IPR002110 GO:0005515
Bpe15g01163 657 SMART c3hfinal6 283 306 IPR000571 GO:0046872
Bpe15g01163 657 SMART c3hfinal6 248 274 IPR000571 GO:0046872
Bpe15g01163 657 ProSiteProfiles Ankyrin repeat profile. 58 82 IPR002110 GO:0005515
Bpe15g01163 657 Gene3D - 7 97 IPR036770 -
Bpe15g01163 657 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 29 7 655 - -
Bpe15g01163 657 SUPERFAMILY Ankyrin repeat 9 138 IPR036770 -
Bpe15g01163 657 Gene3D - 98 157 IPR036770 -
Bpe15g01163 657 ProSiteProfiles Ankyrin repeat region circular profile. 93 123 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe04g01745 Bpe15g01163 CCT
Bpe04g01745 Bpe15g01163 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe15g01163 Bpe-Chr15:20490445 Bpe15g01239 Bpe-Chr15:20940315 0 wgd
Bpe15g01163 Bpe-Chr15:20490445 Bpe04g01745 Bpe-Chr4:23157803 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22659 PF12796 Ank_2 2.20E-09 CL0465 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g01163 - - zju:107404189 823.542