Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g01174 ATGGGTGGAAATTCGCCGTGTGCCTCCTGCAAGCTTTTGAGAAGACGATGTGCAAAGGAATGCATCTTCGCCCCTTATTTTCCCTCTGATGATCCTCATAAGTTTGCCATTGTTCACAAGGTTTTCGGAGCCAGCAATATCAGCAAAATGTTGCAGGAGCTCCCAATTCATCAGCGAGCAGATGCAGTGAGCAGTCTGGTTTATGAAGCTAATGCAAGAATGAGAGACCCGGTCTATGGGTGCGTAGGAGCTATATCTTATCTTCAAAGCCAGGTTTCTCAGCTTCAAATGGAACTTGCCGTGGCTCAGGCGGAGATTCTATGCATCCAAATGCAACAAGGGCCAATGGCTGTGTTGCCAAGTACGTCGCCATTAAACCCAGATGACAAGTCTTATAATTTTCTCCCAAATAATCTCCCCCAGTACCTAAATTTTGCTTCCTCCACTAATGTAATCCACGACTCTCTCAAAAGGGAGAGCCTTTTCGGCCACGACATGGTTTCTTAG 507 46.35 MGGNSPCASCKLLRRRCAKECIFAPYFPSDDPHKFAIVHKVFGASNISKMLQELPIHQRADAVSSLVYEANARMRDPVYGCVGAISYLQSQVSQLQMELAVAQAEILCIQMQQGPMAVLPSTSPLNPDDKSYNFLPNNLPQYLNFASSTNVIHDSLKRESLFGHDMVS 168
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 20604486 20605159 + Bpe002084.1 Bpe15g01174 116853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g01174 168 Coils Coil 85 105 - -
Bpe15g01174 168 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
Bpe15g01174 168 PANTHER LOB DOMAIN-CONTAINING PROTEIN 12-LIKE 1 161 - -
Bpe15g01174 168 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 161 - -
Bpe15g01174 168 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01869 Bpe-Chr4:23824443 Bpe15g01174 Bpe-Chr15:20604486 4.21E-46 dispersed
Bpe08g01337 Bpe-Chr8:14548087 Bpe15g01174 Bpe-Chr15:20604486 1.34E-51 dispersed
Bpe11g00799 Bpe-Chr11:5972106 Bpe15g01174 Bpe-Chr15:20604486 1.03E-47 dispersed
Bpe15g01073 Bpe-Chr15:19963663 Bpe15g01174 Bpe-Chr15:20604486 8.81E-47 dispersed
Bpe07g00503 Bpe-Chr7:10002124 Bpe15g01174 Bpe-Chr15:20604486 4.92E-27 transposed
Bpe11g01042 Bpe-Chr11:7773367 Bpe15g01174 Bpe-Chr15:20604486 1.24E-62 transposed
Bpe15g01174 Bpe-Chr15:20604486 Bpe15g01233 Bpe-Chr15:20922408 1.70E-42 wgd
Bpe15g01174 Bpe-Chr15:20604486 Bpe04g01798 Bpe-Chr4:23446699 6.89E-111 wgd
Bpe15g01174 Bpe-Chr15:20604486 Bpe08g01408 Bpe-Chr8:14943027 4.53E-69 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22661 PF03195 LOB 2.40E-42 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g01174 - - qsu:112026683 283.878