Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe15g01174 | ATGGGTGGAAATTCGCCGTGTGCCTCCTGCAAGCTTTTGAGAAGACGATGTGCAAAGGAATGCATCTTCGCCCCTTATTTTCCCTCTGATGATCCTCATAAGTTTGCCATTGTTCACAAGGTTTTCGGAGCCAGCAATATCAGCAAAATGTTGCAGGAGCTCCCAATTCATCAGCGAGCAGATGCAGTGAGCAGTCTGGTTTATGAAGCTAATGCAAGAATGAGAGACCCGGTCTATGGGTGCGTAGGAGCTATATCTTATCTTCAAAGCCAGGTTTCTCAGCTTCAAATGGAACTTGCCGTGGCTCAGGCGGAGATTCTATGCATCCAAATGCAACAAGGGCCAATGGCTGTGTTGCCAAGTACGTCGCCATTAAACCCAGATGACAAGTCTTATAATTTTCTCCCAAATAATCTCCCCCAGTACCTAAATTTTGCTTCCTCCACTAATGTAATCCACGACTCTCTCAAAAGGGAGAGCCTTTTCGGCCACGACATGGTTTCTTAG | 507 | 46.35 | MGGNSPCASCKLLRRRCAKECIFAPYFPSDDPHKFAIVHKVFGASNISKMLQELPIHQRADAVSSLVYEANARMRDPVYGCVGAISYLQSQVSQLQMELAVAQAEILCIQMQQGPMAVLPSTSPLNPDDKSYNFLPNNLPQYLNFASSTNVIHDSLKRESLFGHDMVS | 168 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 20604486 | 20605159 | + | Bpe002084.1 | Bpe15g01174 | 116853 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe15g01174 | 168 | Coils | Coil | 85 | 105 | - | - | |
Bpe15g01174 | 168 | ProSiteProfiles | LOB domain profile. | 5 | 106 | IPR004883 | - | |
Bpe15g01174 | 168 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 12-LIKE | 1 | 161 | - | - | |
Bpe15g01174 | 168 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 1 | 161 | - | - | |
Bpe15g01174 | 168 | Pfam | Lateral organ boundaries (LOB) domain | 6 | 103 | IPR004883 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe04g01869 | Bpe-Chr4:23824443 | Bpe15g01174 | Bpe-Chr15:20604486 | 4.21E-46 | dispersed | |
Bpe08g01337 | Bpe-Chr8:14548087 | Bpe15g01174 | Bpe-Chr15:20604486 | 1.34E-51 | dispersed | |
Bpe11g00799 | Bpe-Chr11:5972106 | Bpe15g01174 | Bpe-Chr15:20604486 | 1.03E-47 | dispersed | |
Bpe15g01073 | Bpe-Chr15:19963663 | Bpe15g01174 | Bpe-Chr15:20604486 | 8.81E-47 | dispersed | |
Bpe07g00503 | Bpe-Chr7:10002124 | Bpe15g01174 | Bpe-Chr15:20604486 | 4.92E-27 | transposed | |
Bpe11g01042 | Bpe-Chr11:7773367 | Bpe15g01174 | Bpe-Chr15:20604486 | 1.24E-62 | transposed | |
Bpe15g01174 | Bpe-Chr15:20604486 | Bpe15g01233 | Bpe-Chr15:20922408 | 1.70E-42 | wgd | |
Bpe15g01174 | Bpe-Chr15:20604486 | Bpe04g01798 | Bpe-Chr4:23446699 | 6.89E-111 | wgd | |
Bpe15g01174 | Bpe-Chr15:20604486 | Bpe08g01408 | Bpe-Chr8:14943027 | 4.53E-69 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
22661 | PF03195 | LOB | 2.40E-42 | No_clan | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe15g01174 | - | - | qsu:112026683 | 283.878 |