Cucurbitales platform

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bpe15g01177	ATGTCGACAGAGATAAGACAGAGAAAGCAAAGAAGCAGAGGAGACGGTTCCACAGTCGCGGATACTCTAGCCAAGTGGAAAGTAAATAACTACACTGACTCTTGCAATGATGGGATAAAGAAACCTGGTTATAGAGTTCCAGCAAAAGGATCAAAGAAAGGGTGCATGAAAGGTAAAGGAGGGCCAGAAAATTGGCGTTGCAAATACAGAGGTGTGCGACAGAGGACGTGGGGTAAGTGGGTTGCAGAAATCCGTGAACCCAACAGGGGCAGTAGGCTCTGGTTGGGTACTTATTCTACTGCCATGGAAGCCGCCATTGCTTATGATGCTGCTGCGAGTACCATGTACGGTCCTGGGGCACGTTTGAATTTTCCTGGTGTGACAAGAGATAGAAATTTCATTGGTCCTGTTGACGATGACACTTCTGTGATAACTCAATCAAGCTTGCCTACAGCAGAGTTCGACTCCACTGCAACATCAAATCTGTCTGAGGTTTTTGCTGAAGACTCAAAGCTTGTTTCAGATAATTATGAAAATTGGAGATTGAATGATTTGTCGCCTGCTGAGGAGAAAGTGGGAATCTTAGTGAACTCAGAAGCGAAGGACGAAGAGAAGAATCAAAATTTTGATGATTGGGAGACGATGCCATTGGAAGAAATGTTTGACATGGAAGAAATGCTAAACTTTAACTTGTTAGAAGACCTGAACTTGTTAGAAGATTTTGGCCATGATTCCTGTGATATGAGGCCATATGAGTCATCCTTTCCCTACAATCAAAATACAGAGGCTCTACAGCGGGCTGCGAAGAATTATAATGATTTGAAGTTGGAATTACCGGAGGGATTTTTGATGGAGATGCAAGAGTTTCAATAA	873	43.18	MSTEIRQRKQRSRGDGSTVADTLAKWKVNNYTDSCNDGIKKPGYRVPAKGSKKGCMKGKGGPENWRCKYRGVRQRTWGKWVAEIREPNRGSRLWLGTYSTAMEAAIAYDAAASTMYGPGARLNFPGVTRDRNFIGPVDDDTSVITQSSLPTAEFDSTATSNLSEVFAEDSKLVSDNYENWRLNDLSPAEEKVGILVNSEAKDEEKNQNFDDWETMPLEEMFDMEEMLNFNLLEDLNLLEDFGHDSCDMRPYESSFPYNQNTEALQRAAKNYNDLKLELPEGFLMEMQEFQ	290

Gff information

Chromosome	Start	End	Strand	Old_gene	Gene	Num
15	20630603	20631923	-	Bpe002087.1	Bpe15g01177	116856

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bpe15g01177	290	Pfam	AP2 domain	67	117	IPR001471	GO:0003700\|GO:0006355
	Bpe15g01177	290	ProSiteProfiles	AP2/ERF domain profile.	68	125	IPR001471	GO:0003700\|GO:0006355
	Bpe15g01177	290	PANTHER	DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C	4	226	-	-
	Bpe15g01177	290	PANTHER	DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C	4	226	-	-
	Bpe15g01177	290	Gene3D	AP2/ERF domain	67	127	IPR036955	GO:0003700\|GO:0006355
	Bpe15g01177	290	SUPERFAMILY	DNA-binding domain	68	125	IPR016177	GO:0003677
	Bpe15g01177	290	Coils	Coil	257	277	-	-
	Bpe15g01177	290	PRINTS	Ethylene responsive element binding protein signature	69	80	IPR001471	GO:0003700\|GO:0006355
	Bpe15g01177	290	PRINTS	Ethylene responsive element binding protein signature	91	107	IPR001471	GO:0003700\|GO:0006355
	Bpe15g01177	290	SMART	rav1_2	68	131	IPR001471	GO:0003700\|GO:0006355
	Bpe15g01177	290	CDD	AP2	67	125	IPR001471	GO:0003700\|GO:0006355

Event-related genes

Select	Gene_1	Gene_2	Event_name
	Bpe04g01755	Bpe15g01177	CCT

Duplication type information

Select	Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
	Bpe15g01177	Bpe-Chr15:20630603	Bpe03g01125	Bpe-Chr3:30318381	1.10E-31	dispersed
	Bpe15g01177	Bpe-Chr15:20630603	Bpe04g01755	Bpe-Chr4:23209785	4.05E-45	wgd

Transcription factors information

Select	Gene	Hmm_acc	Hmm_name	Score	E-value	Regulatory Factors	Family
	22662	PF00847	AP2	3.90E-14	CL0081	Bpe	TF

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bpe15g01177	-		K09286	mnt:21395493	188.348