Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g01203 ATGGGAGCTTTGAGCAACGCTGGTTTCGCTTCAGCGTTCAAATCTCCTCTCGACAACGACTTCATCTTGAGGACAAAGAGCAAAGGCAGCCATGCTTCATCTTGCTTCATTGTTTCCAGCAACTTTTCCAGATTCAGCAGAATCTACAGCTCGATATCTGAGACTGGGAGTGAGATTCAGAAACCCCCCTCTAAGCCCACAACCTCGAACGGCAAGAACAGAATGGAAGAGTACAATATAGCGATGAAGAAGATGATGCGGAATCCGTACGAGTATCATCACGATCTGGGCATGAACTACACCCTCATAGCGGACAATCTGATAGTGGGATCTCAGCCTCAGAAACCCGAAGATATAGATCACTTGAAAAAAGAAGAGAAGGTGGCTTATATTCTCAATTTGCAGCAGGATAAGGACGTTGAGTATTGGGGAATCGACTTGCAAGAGATAATAAAAAGATGTCGAGATCTTGGTATTCGCCACATGAGGAGGCCTGCGAGAGATTTTGACCCTGATTCCCTGAGATGTGGATTGCCGAAAGCCGTTTCTTCGTTAGAATGGGCGATATCTGAAGGACAAGGAAAAGTTTATGTGCATTGCACTGCTGGACTTGGGAGGGCGCCTGCTGTTGCAATTGCTTATATGTTCTGGTTTTCTGGAATGAATCTTAATACAGCTTATGATACACTGACTTCAAAGAGACCTTGTGGACCCAACAAAAGAGCCATACGAGGCGCTACTTATGATCTCGCAAAGAACAATCCGTGGAAGGAGCCATTCGAGAATCTACCAGATTATGCATTCGAGGATGTTGCTGATTGGGAGAGAAACTTGATTCAAGAACAAGTTCGTACCCTCCGTGGCACCTGA 870 45.52 MGALSNAGFASAFKSPLDNDFILRTKSKGSHASSCFIVSSNFSRFSRIYSSISETGSEIQKPPSKPTTSNGKNRMEEYNIAMKKMMRNPYEYHHDLGMNYTLIADNLIVGSQPQKPEDIDHLKKEEKVAYILNLQQDKDVEYWGIDLQEIIKRCRDLGIRHMRRPARDFDPDSLRCGLPKAVSSLEWAISEGQGKVYVHCTAGLGRAPAVAIAYMFWFSGMNLNTAYDTLTSKRPCGPNKRAIRGATYDLAKNNPWKEPFENLPDYAFEDVADWERNLIQEQVRTLRGT 289
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 20746704 20748329 + Bpe002114.1 Bpe15g01203 116882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g01203 289 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 176 235 IPR000387 GO:0016311|GO:0016791
Bpe15g01203 289 ProSiteProfiles Dual specificity protein phosphatase domain profile. 99 256 IPR020422 GO:0006470|GO:0008138
Bpe15g01203 289 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 96 241 IPR029021 -
Bpe15g01203 289 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF2, CHLOROPLASTIC 3 289 - -
Bpe15g01203 289 SMART dsp_5 99 249 IPR020422 GO:0006470|GO:0008138
Bpe15g01203 289 CDD DSP_laforin-like 98 245 IPR045204 GO:0019203|GO:0046838
Bpe15g01203 289 Pfam Dual specificity phosphatase, catalytic domain 120 239 IPR000340 GO:0008138|GO:0016311
Bpe15g01203 289 PANTHER DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN 3 289 - -
Bpe15g01203 289 Gene3D Protein tyrosine phosphatase superfamily 82 289 IPR029021 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01910 Bpe-Chr4:24071260 Bpe15g01203 Bpe-Chr15:20746704 1.04E-10 dispersed
Bpe11g00633 Bpe-Chr11:4899074 Bpe15g01203 Bpe-Chr15:20746704 6.72E-06 dispersed
Bpe15g01203 Bpe-Chr15:20746704 Bpe15g01037 Bpe-Chr15:19749342 4.24E-42 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g01203 - - zju:107413978 448.358