Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g01207 ATGGGAGGTGCATGTGGGTATGGCAATTTATACGGCCAAGGATACGGGACTAATACAGCGGCACTGAGCACTGCTCTGTTCAACAATGGCTTGAGCTGCGGAGCCTGTTACGAAATAACTTGCCGAGATGACCCAAAATGGTGCACTGGGGGTACCATCACCGTCACAGCCACAAATTTCTGCCCTCCAAACGGTGCACTGGCTAATGATAATGGTGGCTGGTGTAATCCTCCGCTTCAGCACTTCGACTTGTCCGAGCCGGTTTTCTTGCAAATCGCTCAATATCGGGCCGGCATTGTTCCAGTCTCTTTTAGAAGTTTTGCTCCAAACAGAGTCTCCTGTATGAAGAAAGGAGGAATAAGGTTCACTGTGAATGGCCACTCTTACTTCAACCTGGTGTTGATCACAAACGTAGGAGGAGCAGGAGATGTTCATTCTGTATCAATCAAAGGCTCGAAAACTGGCTGGCAGAGCATGTCGAGAAACTGGGGTCAGAATTGGCAGAGCAACTCCTACCTCAACGGCCAGACTCTGTCCTTTCAAGTGACAACCAGCGACGGCCGAACTCTCACCAGCTACGACGTCGCGCCGGCTAACTGGCAATTCGGGCAAACGTTTGAGGGAAGCCAATTTTAG 636 50.47 MGGACGYGNLYGQGYGTNTAALSTALFNNGLSCGACYEITCRDDPKWCTGGTITVTATNFCPPNGALANDNGGWCNPPLQHFDLSEPVFLQIAQYRAGIVPVSFRSFAPNRVSCMKKGGIRFTVNGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQSMSRNWGQNWQSNSYLNGQTLSFQVTTSDGRTLTSYDVAPANWQFGQTFEGSQF 211
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 20770144 20770923 - Bpe002118.1 Bpe15g01207 116886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g01207 211 PRINTS Expansin signature 41 52 IPR002963 GO:0009664
Bpe15g01207 211 PRINTS Expansin signature 89 102 IPR002963 GO:0009664
Bpe15g01207 211 PRINTS Expansin signature 53 63 IPR002963 GO:0009664
Bpe15g01207 211 PRINTS Expansin signature 72 89 IPR002963 GO:0009664
Bpe15g01207 211 PRINTS Expansin signature 14 28 IPR002963 GO:0009664
Bpe15g01207 211 PRINTS Expansin signature 165 186 IPR002963 GO:0009664
Bpe15g01207 211 PRINTS Expansin signature 194 210 IPR002963 GO:0009664
Bpe15g01207 211 Gene3D - 1 114 IPR036908 -
Bpe15g01207 211 Pfam Expansin C-terminal domain 120 197 IPR007117 -
Bpe15g01207 211 SUPERFAMILY Barwin-like endoglucanases 1 137 IPR036908 -
Bpe15g01207 211 SUPERFAMILY PHL pollen allergen 116 208 IPR036749 -
Bpe15g01207 211 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 2 119 IPR007112 -
Bpe15g01207 211 PRINTS Expansin/Lol pI family signature 1 19 IPR007118 GO:0005576
Bpe15g01207 211 PRINTS Expansin/Lol pI family signature 97 113 IPR007118 GO:0005576
Bpe15g01207 211 PRINTS Expansin/Lol pI family signature 23 41 IPR007118 GO:0005576
Bpe15g01207 211 PRINTS Expansin/Lol pI family signature 194 208 IPR007118 GO:0005576
Bpe15g01207 211 PRINTS Expansin/Lol pI family signature 156 170 IPR007118 GO:0005576
Bpe15g01207 211 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 129 208 IPR007117 -
Bpe15g01207 211 SMART dpbb_1 19 104 IPR007112 -
Bpe15g01207 211 Gene3D - 117 211 IPR036749 -
Bpe15g01207 211 Pfam Lytic transglycolase 19 104 IPR009009 -
Bpe15g01207 211 PANTHER EXPANSIN-A15 1 211 IPR002963 GO:0009664
Bpe15g01207 211 PANTHER EXPANSIN 1 211 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g01647 Bpe-Chr11:12629830 Bpe15g01207 Bpe-Chr15:20770144 6.13E-114 dispersed
Bpe15g01207 Bpe-Chr15:20770144 Bpe10g00880 Bpe-Chr10:14579466 3.47E-123 dispersed
Bpe15g01207 Bpe-Chr15:20770144 Bpe13g01406 Bpe-Chr13:19294928 3.72E-125 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g01207 - K20628 nnu:104593779 400.593