Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g01214 ATGGATCCAGACGCCTTCACCGCCAGCTTATACAAGTGGGACCCTCGGGCTGCTGTTGGAGGACCATCCACCCGCTTACTGGACCAGGTGGCTACCCCACCCACCGGAGCTGCACCTGTCCCCACGACCTTCTCGGTCCGACCGAGGGATCTGGGTGGCCTTGAGGACTTGTTTCAGGCTTACGGCATTAGATACTACACGGCTGCCAAGATAGCGGAGCTTGGGTTCACTGTGAGCACTCTTTTGGACATGAAAGATGGGGAGCTGGACGAGATGATGAACAGCCTCTCGCAGATATTTCGGTGGGACCTCTTGGTGGGAGAAAGGTACGGCATTAAAGCAGCCGTAAGAGCCGAGCGAAGACGATTGGACGATGAAATGGAATCGCGGCGCCGCCACTTACTCTCCGCTGATACTGCTAATAACGCTCTTGATGCACTTTCTCAGGAAGGATTGTCGGAGGAGCATGTGCAGCAGGAGAAGGAGGTGGTGGGGAGTGGAGGAGGAACGAGAGAAGTAATTGTGGCTTCAGAGAGGAAGAAACAGCGGCATAGGAAGGGGCAGAGAAAAATGCTCGTGGATTTCGATAACGACGGAAACGAAGTGGGAGAAGAAGGCGACGACGATATTAATGGTGCAAATGGAATGAACGAGAGACAACGAGAACACCCGTTCATTGTAACAGAACCAGGAGAAGTTGCCAGAGGGAAGAAGAATGGCTTAGATTACCTTTTTCATCTCTACGAACAGTGCCGAGAATTTCTGATCCAGGTGCAGAATATAGCCAAGGACCACGGCGAGAAATGCCCCACCAAGGTGACAAATCAGGTGTTTAGATACGCGAAGAAAGCCGGAGCGAGCTACATCAACAAGCCCAAAATGCGACACTATGTGCATTGCTACGCCCTGCACTNNNNNNNNNNTTTACGTTTCCACTGTTCTCTCTGCGTTGATACTCTGCAAAAATGTCTAAAGCTCCGCGAAGAGTGA 990 51.41 MDPDAFTASLYKWDPRAAVGGPSTRLLDQVATPPTGAAPVPTTFSVRPRDLGGLEDLFQAYGIRYYTAAKIAELGFTVSTLLDMKDGELDEMMNSLSQIFRWDLLVGERYGIKAAVRAERRRLDDEMESRRRHLLSADTANNALDALSQEGLSEEHVQQEKEVVGSGGGTREVIVASERKKQRHRKGQRKMLVDFDNDGNEVGEEGDDDINGANGMNERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLIQVQNIAKDHGEKCPTKVTNQVFRYAKKAGASYINKPKMRHYVHCYALHXXXXLRFHCSLCVDTLQKCLKLREE 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 20790034 20791406 + Bpe002124.1 Bpe15g01214 116893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g01214 329 Pfam DNA Binding Domain (C-terminal) Leafy/Floricaula 213 305 IPR035209 GO:0003677
Bpe15g01214 329 PANTHER PROTEIN LEAFY 1 305 - -
Bpe15g01214 329 MobiDBLite consensus disorder prediction 179 216 - -
Bpe15g01214 329 Gene3D Protein LEAFY 209 328 IPR038276 -
Bpe15g01214 329 PANTHER PROTEIN LEAFY 1 305 IPR002910 GO:0003677|GO:0006355
Bpe15g01214 329 Pfam Floricaula / Leafy protein SAM domain 50 127 IPR035079 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe15g01214 Bpe-Chr15:20790034 Bpe04g01781 Bpe-Chr4:23346746 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22666 PF17538 C_LFY_FLO 1.80E-58 CL0123 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g01214 - - qsu:112014158 451.055