Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g01223 ATGTCAAAAGAAAGGGAGAGATTTGATGAGATAGGGAAGAAGATAAAGAGAGAAGCCGATGCCTACTATCAAATGGGAAGAACACACATGGGTCCTCATGGAGTCCTAAACACCATAACGCCATGCGCAGCCTGTAAGCTTCTTAGACGAAGATGCGCGCAGGAGTGTCCTTTTTCTCCATATTTCTCTCCCCATGAGCCTCAAAAGTTTGCTTCAGTTCACAAAGTCTTCGGCGCCAGCAACGTCTCCAAGATGCTAATGGAGGTGTCGGAGAGTCAAAGAGCAGACGCTGCTAACAGCCTAGTTTACGAAGCCAACTTGAGGCTAAGAGACCCAGTCTATGGCTGCATGGGTGCGATTTTAGCTCTGCAACAGCAAATTCAGTCTTTAGAAACTGAGCTTAATGCAGTAAGGACTCAAATAATGAAACTCAAGTACAGTGAATCTAATATTCTACCTACTTCTCAAGTCACTTTTCTCAATTCTCCCGGAGCTGTTTCAGTCGCTGCACCGTCCCATCCACCGCCGTCAACTTCGCCCTCACCACTTGCCCTTCCTCCCCTTTCCTCATCTTCTGTCTACCACCAGTCTACCACTACCAACGACCACCGTAGTATGTCCTCTCAAAATATTGCCTACTTTGCCTGA 648 47.07 MSKERERFDEIGKKIKREADAYYQMGRTHMGPHGVLNTITPCAACKLLRRRCAQECPFSPYFSPHEPQKFASVHKVFGASNVSKMLMEVSESQRADAANSLVYEANLRLRDPVYGCMGAILALQQQIQSLETELNAVRTQIMKLKYSESNILPTSQVTFLNSPGAVSVAAPSHPPPSTSPSPLALPPLSSSSVYHQSTTTNDHRSMSSQNIAYFA 215
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 20852868 20853847 + Bpe002131.1 Bpe15g01223 116902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g01223 215 MobiDBLite consensus disorder prediction 184 207 - -
Bpe15g01223 215 MobiDBLite consensus disorder prediction 169 183 - -
Bpe15g01223 215 Pfam Lateral organ boundaries (LOB) domain 41 138 IPR004883 -
Bpe15g01223 215 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 24 214 - -
Bpe15g01223 215 ProSiteProfiles LOB domain profile. 40 141 IPR004883 -
Bpe15g01223 215 PANTHER LOB DOMAIN-CONTAINING PROTEIN 15 24 214 - -
Bpe15g01223 215 Coils Coil 120 147 - -
Bpe15g01223 215 MobiDBLite consensus disorder prediction 165 207 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g00799 Bpe-Chr7:14363891 Bpe15g01223 Bpe-Chr15:20852868 9.16E-26 dispersed
Bpe08g01420 Bpe-Chr8:14992063 Bpe15g01223 Bpe-Chr15:20852868 1.39E-73 dispersed
Bpe11g01042 Bpe-Chr11:7773367 Bpe15g01223 Bpe-Chr15:20852868 1.19E-47 dispersed
Bpe12g00562 Bpe-Chr12:11471464 Bpe15g01223 Bpe-Chr15:20852868 2.33E-28 dispersed
Bpe15g01223 Bpe-Chr15:20852868 Bpe13g00079 Bpe-Chr13:4520189 1.38E-43 dispersed
Bpe15g01197 Bpe-Chr15:20728436 Bpe15g01223 Bpe-Chr15:20852868 1.66E-37 wgd
Bpe15g01223 Bpe-Chr15:20852868 Bpe04g01761 Bpe-Chr4:23257142 2.64E-85 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22668 PF03195 LOB 3.30E-40 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g01223 - - vvi:100251929 283.878