Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe15g01223 | ATGTCAAAAGAAAGGGAGAGATTTGATGAGATAGGGAAGAAGATAAAGAGAGAAGCCGATGCCTACTATCAAATGGGAAGAACACACATGGGTCCTCATGGAGTCCTAAACACCATAACGCCATGCGCAGCCTGTAAGCTTCTTAGACGAAGATGCGCGCAGGAGTGTCCTTTTTCTCCATATTTCTCTCCCCATGAGCCTCAAAAGTTTGCTTCAGTTCACAAAGTCTTCGGCGCCAGCAACGTCTCCAAGATGCTAATGGAGGTGTCGGAGAGTCAAAGAGCAGACGCTGCTAACAGCCTAGTTTACGAAGCCAACTTGAGGCTAAGAGACCCAGTCTATGGCTGCATGGGTGCGATTTTAGCTCTGCAACAGCAAATTCAGTCTTTAGAAACTGAGCTTAATGCAGTAAGGACTCAAATAATGAAACTCAAGTACAGTGAATCTAATATTCTACCTACTTCTCAAGTCACTTTTCTCAATTCTCCCGGAGCTGTTTCAGTCGCTGCACCGTCCCATCCACCGCCGTCAACTTCGCCCTCACCACTTGCCCTTCCTCCCCTTTCCTCATCTTCTGTCTACCACCAGTCTACCACTACCAACGACCACCGTAGTATGTCCTCTCAAAATATTGCCTACTTTGCCTGA | 648 | 47.07 | MSKERERFDEIGKKIKREADAYYQMGRTHMGPHGVLNTITPCAACKLLRRRCAQECPFSPYFSPHEPQKFASVHKVFGASNVSKMLMEVSESQRADAANSLVYEANLRLRDPVYGCMGAILALQQQIQSLETELNAVRTQIMKLKYSESNILPTSQVTFLNSPGAVSVAAPSHPPPSTSPSPLALPPLSSSSVYHQSTTTNDHRSMSSQNIAYFA | 215 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 20852868 | 20853847 | + | Bpe002131.1 | Bpe15g01223 | 116902 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe15g01223 | 215 | MobiDBLite | consensus disorder prediction | 184 | 207 | - | - | |
Bpe15g01223 | 215 | MobiDBLite | consensus disorder prediction | 169 | 183 | - | - | |
Bpe15g01223 | 215 | Pfam | Lateral organ boundaries (LOB) domain | 41 | 138 | IPR004883 | - | |
Bpe15g01223 | 215 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 24 | 214 | - | - | |
Bpe15g01223 | 215 | ProSiteProfiles | LOB domain profile. | 40 | 141 | IPR004883 | - | |
Bpe15g01223 | 215 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 15 | 24 | 214 | - | - | |
Bpe15g01223 | 215 | Coils | Coil | 120 | 147 | - | - | |
Bpe15g01223 | 215 | MobiDBLite | consensus disorder prediction | 165 | 207 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe07g00799 | Bpe-Chr7:14363891 | Bpe15g01223 | Bpe-Chr15:20852868 | 9.16E-26 | dispersed | |
Bpe08g01420 | Bpe-Chr8:14992063 | Bpe15g01223 | Bpe-Chr15:20852868 | 1.39E-73 | dispersed | |
Bpe11g01042 | Bpe-Chr11:7773367 | Bpe15g01223 | Bpe-Chr15:20852868 | 1.19E-47 | dispersed | |
Bpe12g00562 | Bpe-Chr12:11471464 | Bpe15g01223 | Bpe-Chr15:20852868 | 2.33E-28 | dispersed | |
Bpe15g01223 | Bpe-Chr15:20852868 | Bpe13g00079 | Bpe-Chr13:4520189 | 1.38E-43 | dispersed | |
Bpe15g01197 | Bpe-Chr15:20728436 | Bpe15g01223 | Bpe-Chr15:20852868 | 1.66E-37 | wgd | |
Bpe15g01223 | Bpe-Chr15:20852868 | Bpe04g01761 | Bpe-Chr4:23257142 | 2.64E-85 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
22668 | PF03195 | LOB | 3.30E-40 | No_clan | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe15g01223 | - | - | vvi:100251929 | 283.878 |