Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe15g01233 | ATGAGGAGTGGGATCGAGCCTCGTTCGACTGCCTCATGTGCAGCCTGCAAATTGTTGAAAAGAAAATGCACTTCTGCTTGTATATTTGCACCCTATTTTCAATCGAACGAGACGAAGAAATTTGCCAAGGTTCACAAAGTGTTTGGGGCAAGCAACGTGAGCAAGATTCTAAACGAAGTACCTGAGCAGCAGCGAGAAGACACGGCCAATTCATTGGCTTTTGAAGCAGAAGCAAGACTCAGGGACCCTGTCTATGGCTGCATTGGTGCCATAGCTTTGCTGCAGAGAAAAATGGCGGAGCTTCAACATGATCTGGCCATTGCCAAATCTCGTCTCGCTTACTATACTACTTCTTCTTCCAAGTCAGTTGATGATGGTGTAACGATGATGGTGTATTCCAGTGACCTTTCTCCTTGCAGCGAATTGGGGGCCAATGTTTATCAGGATTCATCAGGTGCACTAAGCTTAGATGCAAACGTGAATCATTTTAGCAGCTTCCCATGTAATATATATAATATGTGA | 522 | 44.64 | MRSGIEPRSTASCAACKLLKRKCTSACIFAPYFQSNETKKFAKVHKVFGASNVSKILNEVPEQQREDTANSLAFEAEARLRDPVYGCIGAIALLQRKMAELQHDLAIAKSRLAYYTTSSSKSVDDGVTMMVYSSDLSPCSELGANVYQDSSGALSLDANVNHFSSFPCNIYNM | 173 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 20922408 | 20922929 | + | Bpe002140.1 | Bpe15g01233 | 116912 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe15g01233 | 173 | Coils | Coil | 91 | 111 | - | - | |
Bpe15g01233 | 173 | ProSiteProfiles | LOB domain profile. | 11 | 112 | IPR004883 | - | |
Bpe15g01233 | 173 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 21 | 1 | 133 | - | - | |
Bpe15g01233 | 173 | Pfam | Lateral organ boundaries (LOB) domain | 12 | 109 | IPR004883 | - | |
Bpe15g01233 | 173 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 1 | 133 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe15g01233 | Bpe-Chr15:20922408 | Bpe13g00079 | Bpe-Chr13:4520189 | 5.11E-45 | dispersed | |
Bpe15g00729 | Bpe-Chr15:17804876 | Bpe15g01233 | Bpe-Chr15:20922408 | 1.76E-21 | transposed | |
Bpe15g01174 | Bpe-Chr15:20604486 | Bpe15g01233 | Bpe-Chr15:20922408 | 1.70E-42 | wgd | |
Bpe15g01233 | Bpe-Chr15:20922408 | Bpe04g01798 | Bpe-Chr4:23446699 | 4.89E-42 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
22670 | PF03195 | LOB | 2.10E-38 | No_clan | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe15g01233 | - | - | egr:104454412 | 209.534 |