Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g01239 ATGTGTGGTGATATGAGTATTAAACTTGGTTCTTTAAATTTTATCATGGAGAATGAAATTCAGAAGCAAAACAAGAGAATTTTCTCTGGTGGTTCCATTTTACTTGATTTAGCAGCCTCCGACGATCTTGATGCTTTCAAGAGAGAAGTTGAAGAGAAAGGCCTCGATATCAATGAGGTGGCCTCTTGGTATGGCAGGAAAATTGGGTCGAGAAAGATGGGTTTCGAGGAAAGGACCCCACTTTTAATTGCAGCCATGTTTGCAAGTGCAAAGATCATGGAGTACATAATCAAAACTGGGAAGGTCGATGTTAATAGGGCTTATGGTTCAGATAAGGCCACTGCCCTCCATTGTGCTGCTGCTGGTGGATCAAGCGATTCAACAGAGGTTATGAAACTCTTACTTGATGCCTCTGCTGATGCTAATTGTGTCGATTCTAACGGCAACAAGCCTGTTGATTTGATTGCCCGGGCTATGAAATTGCTTCCCAATTCAAGGAGAAAGGCAATGGAGATGTTGCTTAACGGTTATTACTTGAGTGGTGAAGGTGCTCGGAGCATTGAGCAAATTGAAAATCAGCAAAAACTCACAGGGTCGATGGTAGTAAAAGACGGGATTGAGAGGAAAGAATATCCTCTTGATGTTTCCTTGCCTGACATAAACATTGGGATTTATGGAACTGACGAGTTTAGAATGTATATTTTTAAGGTGAAACCGTGCTCCAGGGCTTACACCCACGATTGGACCGAATGCCCTTTCGCACATCCAGGTGAGAATGCTAGGCGACGGGATCCTAAAAAATATCCCTATAGCTGTGTCCCATGCCCTGAGTTCCGAAAAGGGGCTTGCCAAAAGGGTGATGCGTGTGAATATGCACATGGAGTCTTTGAATCATGGCTTCACCCTGCTCAATACAGGACCAGGCTTTGCAAGGACGAGATAGGGTGTGCAAGGAAAGTGTGCTTTTTCGCCCACAAACCTGAAGAATTACGACCCGTTTATGCCTCCACTGGCTCGGCCTTGCCATCACCTCGCTCACACTCTGTCAGCGGCTCAGAAATGGAGGCTTTGAGTCCATTAGCTCTTGGTTCTTCGACTTTATCTTTGTCTGTTCCGGCTACATCAACCCTGCCCATGTCTCCTTTGGCATCTGTATCATCTCCCATGAGTGGGAGTTTGTGGCAAAACAAAGTCAGCCTCACACCTCCTACTTTGCAGTTGCCGGGTAGTAGACTGAAGGCTTCTTCTAGTGCTAGAGATTTAGATTTCGAAATGGAATTGCTCGGCTTGGAAAATCGAACCAAGCAACAGCAACAATATCAGCATCTAGTGGATGAGATATCTCGTCTTTCCTCGCCATCTTATTGGAACAATGATTTTAGGAGTGGAGAATTGAAACAGATCAACTATGGTGATATTTTAGGATCTTTAGATTCTCCACAGTTGTCTCAGTTTCAGGGTCTCTCACAAAAACTATCAACGCCAACTCAATTCCAAACAAGGCCTCAAACAAGCCAAGGAATGAATCAACTTCGTTCAAGTTACCCCGCCAAGCTCTCCTCTTCACCAGCTCGGAAACCTTCACCATTCGGGCTTGACTCATCGGCTGCAGTGGCATCTGCAGTTATGAACTCCAGGTCATCAGCCTTTGAGAAGCGGAGCCAGAGTTTCATCGATCGTGCCGCTCCAGCCCAAGTATCCAGCCATACAGTCTCTTCAAATCTGTCATCATGGGCCTCCCCAGATGGGAAATTAGATTGGAGTGTTCAAGGAGATGATCTAAAAAAGCTGAAAAAGTCAGCTTCCTTCGGGTTAAGAACTAGAGCTCCTGGCCCGCGATCTGCCCTTGATGAGCCAGATGTGTCCTGGGTTAACTCCTTGGTTAAGGACGTTCCTGCGGAGAAATCAGCTCGCAGTCTTGAGAAGAAATCTCGCGAGTTTCTTCCATCTTGGGTGGATCAGCTATACATAGAACAGGAGCAGATGGTGGCATAG 1995 45.81 MCGDMSIKLGSLNFIMENEIQKQNKRIFSGGSILLDLAASDDLDAFKREVEEKGLDINEVASWYGRKIGSRKMGFEERTPLLIAAMFASAKIMEYIIKTGKVDVNRAYGSDKATALHCAAAGGSSDSTEVMKLLLDASADANCVDSNGNKPVDLIARAMKLLPNSRRKAMEMLLNGYYLSGEGARSIEQIENQQKLTGSMVVKDGIERKEYPLDVSLPDINIGIYGTDEFRMYIFKVKPCSRAYTHDWTECPFAHPGENARRRDPKKYPYSCVPCPEFRKGACQKGDACEYAHGVFESWLHPAQYRTRLCKDEIGCARKVCFFAHKPEELRPVYASTGSALPSPRSHSVSGSEMEALSPLALGSSTLSLSVPATSTLPMSPLASVSSPMSGSLWQNKVSLTPPTLQLPGSRLKASSSARDLDFEMELLGLENRTKQQQQYQHLVDEISRLSSPSYWNNDFRSGELKQINYGDILGSLDSPQLSQFQGLSQKLSTPTQFQTRPQTSQGMNQLRSSYPAKLSSSPARKPSPFGLDSSAAVASAVMNSRSSAFEKRSQSFIDRAAPAQVSSHTVSSNLSSWASPDGKLDWSVQGDDLKKLKKSASFGLRTRAPGPRSALDEPDVSWVNSLVKDVPAEKSARSLEKKSREFLPSWVDQLYIEQEQMVA 664
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 20940315 20942309 - Bpe002146.1 Bpe15g01239 116918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g01239 664 Gene3D - 15 175 IPR036770 -
Bpe15g01239 664 Gene3D - 270 332 - -
Bpe15g01239 664 ProSiteProfiles Ankyrin repeat region circular profile. 111 145 - -
Bpe15g01239 664 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 274 294 IPR000571 GO:0046872
Bpe15g01239 664 Pfam Ankyrin repeats (3 copies) 69 144 IPR002110 GO:0005515
Bpe15g01239 664 SMART c3hfinal6 269 295 IPR000571 GO:0046872
Bpe15g01239 664 SMART c3hfinal6 304 327 IPR000571 GO:0046872
Bpe15g01239 664 ProSiteProfiles Ankyrin repeat profile. 111 146 IPR002110 GO:0005515
Bpe15g01239 664 ProSiteProfiles Zinc finger C3H1-type profile. 269 296 IPR000571 GO:0046872
Bpe15g01239 664 SMART ANK_2a 76 106 IPR002110 GO:0005515
Bpe15g01239 664 SMART ANK_2a 111 143 IPR002110 GO:0005515
Bpe15g01239 664 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 29 18 663 - -
Bpe15g01239 664 MobiDBLite consensus disorder prediction 489 531 - -
Bpe15g01239 664 SUPERFAMILY Ankyrin repeat 29 154 IPR036770 -
Bpe15g01239 664 MobiDBLite consensus disorder prediction 489 521 - -
Bpe15g01239 664 PANTHER UNKEMPT FAMILY MEMBER 18 663 IPR045234 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00541 Bpe-Chr3:25640373 Bpe15g01239 Bpe-Chr15:20940315 2.85E-134 dispersed
Bpe08g00070 Bpe-Chr8:378670 Bpe15g01239 Bpe-Chr15:20940315 0 dispersed
Bpe10g00548 Bpe-Chr10:12538611 Bpe15g01239 Bpe-Chr15:20940315 3.11E-114 dispersed
Bpe11g00093 Bpe-Chr11:651152 Bpe15g01239 Bpe-Chr15:20940315 5.35E-145 dispersed
Bpe15g01163 Bpe-Chr15:20490445 Bpe15g01239 Bpe-Chr15:20940315 0 wgd
Bpe15g01239 Bpe-Chr15:20940315 Bpe04g01745 Bpe-Chr4:23157803 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22671 PF12796 Ank_2 9.50E-07 CL0465 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g01239 - - jre:109007162 862.833