Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe15g01272 | ATGGCTGAAATTTGCTGCGAGCTTGTTGGGGAAGGTGAAGCTTCTGCTCCAGTAGAGCCCAGCTCTCGACCTTCGAGACGTCGAAGAATGGAGGCTTGTCCTATTGCATTAATGGCGGACGCTCCTCTCTCGCCTCAGGCGCTCGAGAGCAGCCGAAAACGCCTCAAAGCCGATATCAACTCGCGTGACAGTGAAAACGCCGTGAAGAGTTGTATTCCTGCGATCCATAAGATTGAAGAAAGGGATGAAGAAGATTCAGGTGAGGGAAAGAATCTCTGTACGAGTCCATCTGTTTCTCGCTCTAAAACTTCGAAGATGGCTCTAATGGAAGAAGAAATTCGACGTCCTAAGTTCGGGGTGACCGCCGTTTGTGGAAGGAGGAGAGAAATGGAAGATGCGGTCTCAATTCAACTATCTTTTTGCGATCATAAAGGTGATGATTCTGTAAAACTCCATCTTTTCGGAGTGTTCGACGGCCATGGTTGCTCTCATGTGGCGATGAAGTGTAAGAAACGATTACATGAGATTGTAAAAGAAGAGATCAAAAAAGATGGTGAGCGCATGAACTGGAAGAGAACGATGGAGAGGTGCTATTTTCGAATGGATGAAGAGGTGAAGCAGTGCTCTAATGAAGTTAGAAGCTCAAATTGTAGGTGCGAACTTCAAGCTTCACAGAGCGACACCGTTGGATCCACAGCTGTTATAGCTGTGGTCACCCCCGACAAAATTATCGTCTCCAACTGCGGCGACTCCCGCGCGGTGCTTTGCAGGAAGGGGAAAGCAATCCCTCTTTCATCTGACCACAAGCCCGATAGACCCGACGAACTGGAGAGGATCGAAGCCGCCGGTGGGAGGGTGATTTATTGGGACGGAGCAAGAGTCCTCGGAGTCCTAGCGATGTCCAGAGCCATAGGAGATAATTACCTAAAACCATACGTCATCCCGGAACCGGAGGTGACAATAACAGATCGGACGGCGGAGGACGAGTGTCTAATCTTAGCAAGCGACGGACTTTGGGACGTAGTAAAAAACGAAACAGCCTGCGGCGTCGCGCGCATGTGCCTCCGATCGCAGAGCAAGGCATCGTCGGGAAGAGATGTTGCAACGGATGCTGGCGAAGAGTTGCCGGACAAGGGATGCTCGGACGCCTCAATATTGCTGACGAAGTTGGCACTGGCCAGGCATAGTTCAGATAACATCAGCGTTGTGGTGGTCGATCTGAGGAAATGA | 1230 | 50.41 | MAEICCELVGEGEASAPVEPSSRPSRRRRMEACPIALMADAPLSPQALESSRKRLKADINSRDSENAVKSCIPAIHKIEERDEEDSGEGKNLCTSPSVSRSKTSKMALMEEEIRRPKFGVTAVCGRRREMEDAVSIQLSFCDHKGDDSVKLHLFGVFDGHGCSHVAMKCKKRLHEIVKEEIKKDGERMNWKRTMERCYFRMDEEVKQCSNEVRSSNCRCELQASQSDTVGSTAVIAVVTPDKIIVSNCGDSRAVLCRKGKAIPLSSDHKPDRPDELERIEAAGGRVIYWDGARVLGVLAMSRAIGDNYLKPYVIPEPEVTITDRTAEDECLILASDGLWDVVKNETACGVARMCLRSQSKASSGRDVATDAGEELPDKGCSDASILLTKLALARHSSDNISVVVVDLRK | 409 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 21139929 | 21141331 | - | Bpe002176.1 | Bpe15g01272 | 116951 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe15g01272 | 409 | ProSiteProfiles | PPM-type phosphatase domain profile. | 117 | 407 | IPR001932 | - | |
Bpe15g01272 | 409 | MobiDBLite | consensus disorder prediction | 79 | 104 | - | - | |
Bpe15g01272 | 409 | PANTHER | PROTEIN PHOSPHATASE 2C 37 | 46 | 409 | - | - | |
Bpe15g01272 | 409 | Pfam | Protein phosphatase 2C | 118 | 382 | IPR001932 | - | |
Bpe15g01272 | 409 | PANTHER | ALPHABET, ISOFORM E-RELATED | 46 | 409 | - | - | |
Bpe15g01272 | 409 | MobiDBLite | consensus disorder prediction | 90 | 104 | - | - | |
Bpe15g01272 | 409 | ProSitePatterns | PPM-type phosphatase domain signature. | 153 | 161 | IPR000222 | GO:0043169 | |
Bpe15g01272 | 409 | CDD | PP2Cc | 117 | 407 | IPR001932 | - | |
Bpe15g01272 | 409 | SMART | PP2C_4 | 106 | 405 | IPR001932 | - | |
Bpe15g01272 | 409 | Gene3D | - | 105 | 409 | IPR036457 | - | |
Bpe15g01272 | 409 | SUPERFAMILY | PP2C-like | 112 | 408 | IPR036457 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe11g00748 | Bpe-Chr11:5673131 | Bpe15g01272 | Bpe-Chr15:21139929 | 5.50E-122 | dispersed | |
Bpe14g00271 | Bpe-Chr14:2768293 | Bpe15g01272 | Bpe-Chr15:21139929 | 2.26E-76 | dispersed | |
Bpe03g00182 | Bpe-Chr3:2223585 | Bpe15g01272 | Bpe-Chr15:21139929 | 1.76E-85 | transposed | |
Bpe01g00119 | Bpe-Chr1:688960 | Bpe15g01272 | Bpe-Chr15:21139929 | 5.92E-125 | wgd | |
Bpe15g01272 | Bpe-Chr15:21139929 | Bpe04g01718 | Bpe-Chr4:23010274 | 0 | wgd | |
Bpe15g01272 | Bpe-Chr15:21139929 | Bpe08g00091 | Bpe-Chr8:499563 | 1.07E-134 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe15g01272 | K14497 | - | egr:104454324 | 480.33 |