Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe15g01274 | ATGGCGAATCGGTGGTGGGCTGGAAATGCCGCCATGAGAGGCATGAACCCTCTGTCATCTCCGCCGTCTCTTCACCTGAGAAATCCCGAGGAAGATCACGACGAAATGAATCGATTTGGAAGCCGGAGAGAGCAAGAATTCATGGAGATGAACCACAATAACAACAATACAACTCCAACAAACAGCAGCTCTTCTACGAAGAAGCAAACCCTTGTTGAAGAAGAAGGCAATCGAGATATCGATCCGGATATTGAAGATCCAAACTCCGGTAGCCAAGAGAGCATCGAACCAGGTCCCGGAAGCTCCAGGCGCAGACCTCGCGGCCGACCAGCTGGGTCTAAGAACAAGCCGAAACCCCCGATTGTGATTACCAAAGAGAGCCCCAACACTCTCCGAAGCCATGTGTTGGAAATCAGCAGCGGCAGTGACGTAGCCGAGAGCATAGCGACCTTTGCCCAACGCCGACAGAGAGGAGTCTCCGTCCTCAGCGGTAATGGCATCGTCACTAATGTAACTCTCCGGCAACCCTCTACGCCGAGTGGAGTGCTCAATCTCCATGGAAGCTTCGAGATTTTGTCTCTCTCCGGCGCTTTTTTGCCAGCCCCATCGCCTCCGGGAGCAACAGGACTAACAATTTACTTAGCTGGTGGGCAAGGTCAAGTGGTGGGTGGCTCGGTGGTGGGTTCTCTAATGGCTGCTGGGCCAGTGATGGTGATCGTAGCAACGTTCACTAATGCTATCTATGAGCGATTGCCGCTGGAGGATGAGGGTGGAAGTGAACAGCATATGCAAGTAGAGCTGCAATCGGGCGGAGGCAATTCAGGTTCTCACGATGTTGGTGGACAAGGCTCAACTCCTATGTATAATCTGCCTCCTAATTTGCTACCCAACAGTCAAAATCAAATGCCCCATGATTTGTTCTGGAGCTCTCCTCGCCCCCCATCCTCTTACTGA | 954 | 52.41 | MANRWWAGNAAMRGMNPLSSPPSLHLRNPEEDHDEMNRFGSRREQEFMEMNHNNNNTTPTNSSSSTKKQTLVEEEGNRDIDPDIEDPNSGSQESIEPGPGSSRRRPRGRPAGSKNKPKPPIVITKESPNTLRSHVLEISSGSDVAESIATFAQRRQRGVSVLSGNGIVTNVTLRQPSTPSGVLNLHGSFEILSLSGAFLPAPSPPGATGLTIYLAGGQGQVVGGSVVGSLMAAGPVMVIVATFTNAIYERLPLEDEGGSEQHMQVELQSGGGNSGSHDVGGQGSTPMYNLPPNLLPNSQNQMPHDLFWSSPRPPSSY | 317 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 21146727 | 21147680 | + | Bpe002178.1 | Bpe15g01274 | 116953 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe15g01274 | 317 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 | 14 | 317 | - | - | |
Bpe15g01274 | 317 | MobiDBLite | consensus disorder prediction | 257 | 317 | - | - | |
Bpe15g01274 | 317 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 128 | 258 | - | - | |
Bpe15g01274 | 317 | MobiDBLite | consensus disorder prediction | 26 | 49 | - | - | |
Bpe15g01274 | 317 | PIRSF | ESCAROLA | 29 | 316 | IPR014476 | GO:0003680 | |
Bpe15g01274 | 317 | MobiDBLite | consensus disorder prediction | 1 | 129 | - | - | |
Bpe15g01274 | 317 | CDD | DUF296 | 132 | 215 | IPR005175 | - | |
Bpe15g01274 | 317 | MobiDBLite | consensus disorder prediction | 50 | 70 | - | - | |
Bpe15g01274 | 317 | ProSiteProfiles | PPC domain profile profile. | 128 | 264 | IPR005175 | - | |
Bpe15g01274 | 317 | MobiDBLite | consensus disorder prediction | 71 | 85 | - | - | |
Bpe15g01274 | 317 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 132 | 245 | IPR005175 | - | |
Bpe15g01274 | 317 | MobiDBLite | consensus disorder prediction | 262 | 306 | - | - | |
Bpe15g01274 | 317 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 | 14 | 317 | IPR014476 | GO:0003680 | |
Bpe15g01274 | 317 | Gene3D | - | 131 | 267 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe15g01274 | Bpe-Chr15:21146727 | Bpe11g00699 | Bpe-Chr11:5379086 | 2.18E-75 | dispersed | |
Bpe15g01274 | Bpe-Chr15:21146727 | Bpe04g01828 | Bpe-Chr4:23606257 | 1.03E-92 | wgd | |
Bpe15g01274 | Bpe-Chr15:21146727 | Bpe04g01716 | Bpe-Chr4:23004462 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe15g01274 | - | - | qsu:112039774 | 378.637 |