Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g01274 ATGGCGAATCGGTGGTGGGCTGGAAATGCCGCCATGAGAGGCATGAACCCTCTGTCATCTCCGCCGTCTCTTCACCTGAGAAATCCCGAGGAAGATCACGACGAAATGAATCGATTTGGAAGCCGGAGAGAGCAAGAATTCATGGAGATGAACCACAATAACAACAATACAACTCCAACAAACAGCAGCTCTTCTACGAAGAAGCAAACCCTTGTTGAAGAAGAAGGCAATCGAGATATCGATCCGGATATTGAAGATCCAAACTCCGGTAGCCAAGAGAGCATCGAACCAGGTCCCGGAAGCTCCAGGCGCAGACCTCGCGGCCGACCAGCTGGGTCTAAGAACAAGCCGAAACCCCCGATTGTGATTACCAAAGAGAGCCCCAACACTCTCCGAAGCCATGTGTTGGAAATCAGCAGCGGCAGTGACGTAGCCGAGAGCATAGCGACCTTTGCCCAACGCCGACAGAGAGGAGTCTCCGTCCTCAGCGGTAATGGCATCGTCACTAATGTAACTCTCCGGCAACCCTCTACGCCGAGTGGAGTGCTCAATCTCCATGGAAGCTTCGAGATTTTGTCTCTCTCCGGCGCTTTTTTGCCAGCCCCATCGCCTCCGGGAGCAACAGGACTAACAATTTACTTAGCTGGTGGGCAAGGTCAAGTGGTGGGTGGCTCGGTGGTGGGTTCTCTAATGGCTGCTGGGCCAGTGATGGTGATCGTAGCAACGTTCACTAATGCTATCTATGAGCGATTGCCGCTGGAGGATGAGGGTGGAAGTGAACAGCATATGCAAGTAGAGCTGCAATCGGGCGGAGGCAATTCAGGTTCTCACGATGTTGGTGGACAAGGCTCAACTCCTATGTATAATCTGCCTCCTAATTTGCTACCCAACAGTCAAAATCAAATGCCCCATGATTTGTTCTGGAGCTCTCCTCGCCCCCCATCCTCTTACTGA 954 52.41 MANRWWAGNAAMRGMNPLSSPPSLHLRNPEEDHDEMNRFGSRREQEFMEMNHNNNNTTPTNSSSSTKKQTLVEEEGNRDIDPDIEDPNSGSQESIEPGPGSSRRRPRGRPAGSKNKPKPPIVITKESPNTLRSHVLEISSGSDVAESIATFAQRRQRGVSVLSGNGIVTNVTLRQPSTPSGVLNLHGSFEILSLSGAFLPAPSPPGATGLTIYLAGGQGQVVGGSVVGSLMAAGPVMVIVATFTNAIYERLPLEDEGGSEQHMQVELQSGGGNSGSHDVGGQGSTPMYNLPPNLLPNSQNQMPHDLFWSSPRPPSSY 317
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 21146727 21147680 + Bpe002178.1 Bpe15g01274 116953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g01274 317 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 14 317 - -
Bpe15g01274 317 MobiDBLite consensus disorder prediction 257 317 - -
Bpe15g01274 317 SUPERFAMILY AF0104/ALDC/Ptd012-like 128 258 - -
Bpe15g01274 317 MobiDBLite consensus disorder prediction 26 49 - -
Bpe15g01274 317 PIRSF ESCAROLA 29 316 IPR014476 GO:0003680
Bpe15g01274 317 MobiDBLite consensus disorder prediction 1 129 - -
Bpe15g01274 317 CDD DUF296 132 215 IPR005175 -
Bpe15g01274 317 MobiDBLite consensus disorder prediction 50 70 - -
Bpe15g01274 317 ProSiteProfiles PPC domain profile profile. 128 264 IPR005175 -
Bpe15g01274 317 MobiDBLite consensus disorder prediction 71 85 - -
Bpe15g01274 317 Pfam Plants and Prokaryotes Conserved (PCC) domain 132 245 IPR005175 -
Bpe15g01274 317 MobiDBLite consensus disorder prediction 262 306 - -
Bpe15g01274 317 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 14 317 IPR014476 GO:0003680
Bpe15g01274 317 Gene3D - 131 267 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe15g01274 Bpe-Chr15:21146727 Bpe11g00699 Bpe-Chr11:5379086 2.18E-75 dispersed
Bpe15g01274 Bpe-Chr15:21146727 Bpe04g01828 Bpe-Chr4:23606257 1.03E-92 wgd
Bpe15g01274 Bpe-Chr15:21146727 Bpe04g01716 Bpe-Chr4:23004462 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g01274 - - qsu:112039774 378.637