Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g01288 ATGGCGGATGCTGAGGACATTCAACCTCTTGTATGTGACAATGGGACAGGAATGGTTAAGGCTGGATTTGCGGGAGACGACGCACCTCGAGCTGTGTTTCCTAGCATTGTAGGTCGTCCTCGGCACACTGGTGTGATGGTTGGTATGGGTCAGAAAGATGCCTACGTTGGTGATGAGGCCCAATCAAAACGTGGTATTTTGACACTTAAATATCCAATTGAGCATGGTATTGTCAGCAACTGGGATGATATGGAAAAGATCTGGCATCATACTTTCTACAATGAGCTCCGAGTTGCCCCAGAGGAGCACCCTGTGCTCCTAACTGAGGCCCCTCTTAACCCAAAGGCTAACCGTGAGAAAATGACGCAAATCATGTTTGAAACCTTCAATACTCCTGCTATGTATGTGGCCATTCAAGCTGTACTTTCACTGTATGCTAGCGGCCGTACAACTGGCATCGTGTTGGATTCAGGTGATGGTGTCAGTCATACAGTTCCTATCTATGAAGGATATGCTCTTCCACATGCCATTCTTCGCCTTGATTTGGCTGGGCGTGATCTCACTGATAACTTGATGAAAATTCTCACCGAGCGTGGGTACTCTTTTACTACCACAGCTGAGCGTGAAATTGTGAGGGATATGAAGGAAAAGTTGGCATATATTGCTCTTGACTATGAGCAGGAAATGGAAACTGCCAAGACTAGCTCATCTGTTGAGAAGAGCTATGAGTTGCCTGATGGGCAGGTCATCACCATTGGTGCTGAACGATTCCGATGCCCAGAGGTTCTCTTCCAGCCATCAATGATTGGAATGGAAGCAGCGGGCATTCATGAAACTACCTACAATTCCATCATGAAGTGTGATGTAGATATCAGGAAAGACCTGTATGGAAACATAGTCCTTTCTGGTGGTTCAACCATGTTCCCAGGAATTGCTGATAGAATGAGTAAGGAAATTTCGGCTCTCGCCCCCAGCAGCATGAAGATTAAGGTTGTGGCACCCCCAGAGAGAAAATACAGTGTCTGGATTGGAGGCTCCATATTGGCTTCTTTGAGCACCTTCCAGCAGATGTGGATTGCCAAGGCAGAGTATGATGAATCTGGGCCATCAATTGTGCATAGGAAGTGCTTCTGA 1134 46.74 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQEMETAKTSSSVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 21213105 21214754 - Bpe002192.1 Bpe15g01288 116967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g01288 377 ProSitePatterns Actins and actin-related proteins signature. 106 118 IPR020902 -
Bpe15g01288 377 Gene3D - 10 371 - -
Bpe15g01288 377 Pfam Actin 5 377 IPR004000 -
Bpe15g01288 377 SUPERFAMILY Actin-like ATPase domain 149 377 IPR043129 -
Bpe15g01288 377 SUPERFAMILY Actin-like ATPase domain 6 155 IPR043129 -
Bpe15g01288 377 SMART actin_3 7 377 IPR004000 -
Bpe15g01288 377 ProSitePatterns Actins signature 1. 55 65 IPR004001 -
Bpe15g01288 377 Gene3D - 140 340 - -
Bpe15g01288 377 PANTHER ACTIN 1 376 IPR004000 -
Bpe15g01288 377 Gene3D Actin; Chain A, domain 4 182 273 - -
Bpe15g01288 377 PANTHER ACTIN-97 1 376 - -
Bpe15g01288 377 CDD NBD_sugar-kinase_HSP70_actin 10 183 - -
Bpe15g01288 377 PRINTS Actin signature 51 62 IPR004000 -
Bpe15g01288 377 PRINTS Actin signature 238 254 IPR004000 -
Bpe15g01288 377 PRINTS Actin signature 63 85 IPR004000 -
Bpe15g01288 377 PRINTS Actin signature 142 161 IPR004000 -
Bpe15g01288 377 PRINTS Actin signature 28 37 IPR004000 -
Bpe15g01288 377 PRINTS Actin signature 117 130 IPR004000 -
Bpe15g01288 377 ProSitePatterns Actins signature 2. 358 366 IPR004001 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe06g00278 Bpe-Chr6:13735910 Bpe15g01288 Bpe-Chr15:21213105 0 dispersed
Bpe07g00726 Bpe-Chr7:13806662 Bpe15g01288 Bpe-Chr15:21213105 3.92E-83 dispersed
Bpe09g00552 Bpe-Chr9:14298660 Bpe15g01288 Bpe-Chr15:21213105 2.36E-103 dispersed
Bpe10g00790 Bpe-Chr10:14056292 Bpe15g01288 Bpe-Chr15:21213105 3.58E-71 dispersed
Bpe01g00134 Bpe-Chr1:786901 Bpe15g01288 Bpe-Chr15:21213105 0 wgd
Bpe15g01121 Bpe-Chr15:20283897 Bpe15g01288 Bpe-Chr15:21213105 4.50E-18 wgd
Bpe15g01288 Bpe-Chr15:21213105 Bpe04g01709 Bpe-Chr4:22952678 0 wgd
Bpe15g01288 Bpe-Chr15:21213105 Bpe08g00106 Bpe-Chr8:572280 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g01288 K10355 - csv:101220611 755.747