Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g01290 TTAATGGCGGAGAGTGGAGGACCGGCGATCGGAATAGACTTGGGGACGACCAACTCATGCGTCGGAGTGTGGATGAATGATCGAGTTGAGATCATTATAAACGAGCAAGGGAAGAGAACTACGCCATCTTACGTTGCTTTCGCCGATTCCCAGCGATTGATCGGTGATAACGCTAAGAGACAGGTCGCCGTTAACCCGACGAATACCGTCTTCGATGTGAAGAGACTCATCGGTAGAAAATTCAGTGATGAAATCGTACAGAATGATTTAAAGCTCTGGCCTTTTCGCGTCGTGGAAGGTCCTCGCGATGAACCGGAGATTGTCGTTATCCACAGAGGTCAGGAGAAACGGATGACTCCCGTTGAAATCTCGGCGATGGTCTTGGAAAAGATGCGTGAAATCGCGACTGCGAAACTCGGATGTCCGGTTAAGAACGCCGTGATCACAGTCCCTGCGTATTTCAATGATTCTCAACGACAAGCCACTATGGACGCCGGAGTGATCGCAGGCCTCAACGTCATGCGAATAATCAACGAGCCCACTGCAGCCGCCATTGCTTACGGGCTCGACAAGAAATCCGATACCGGAGGTCGGAAAACTGTTTTGGTCTTTGATTTGGGTGGAGGAACTCTAGACGTCTCTCTGCTGAGCATTTACCATGGTAACATCGAAGTTAAAGCCACTAATGGCGATTCTCATCTCGGTGGAGAAGATTTCGATAATAGAATGGTGAACCATTTCGTGGATGAGTTTGCGATAAAGACGAATCAGGAGATAAGAGGAAACCCAAAAGCAATTAGAAGATTGAGAAATTCTTGCGAGGAGGCGAAGATGCTTCTCTCAGAAGCAGAAACAGCTTCACTTTCTATCGATTGTTTATACATTGGAATCGATTTCTCTTCCTCCATAACGCGAGCTAAGTTTGTCGAAATCAACAGGGATTTGTTCAGGAAGTGCATGAAAGCTGTCGAAAATTGTTTGGCCGATGCAAATATGGAGAAAAGCTATGTTGACGAGGTTGTTCTTGTCGGTGGTTCAACAAGAATTCCACATCTACAGTATCTTTTGCAGGACTTTTTCAACGGAAAGCAGCTGTGCAAGAGCGTTAATCCGGACGAGGCGGTGGCGCAGGGAGCGGCAATCCAGGCGGCAAAGATGACCGGTAAGTGTGACGGAGACTTGAGAAACTTCAACTTCTCAGAAGTCACTCCGCTCTCTATAGCCGTGGAGACAGACTCCGGCGAGGCTACAGTTTTGATCCCAAAAAATTCGAAAATTCCGATAGAGAAGAAGTACGTTTGTACTACTTTCGAAGACAATCAAACCAAAATAAAGATCCTTGTTTACGAGGGCCAGGGAGTAGATATAGCCATGAAGAGAAACGTAATTGGATCGATTGAACTCAACGGGGTACCTCCAGCTCCCAAGGGTTCTCAAAAAATTTCACTTTTGTTTCAGATCAACTCCAACGGGATCTTGACAATGACAGCTGAGGATCAGACGAATGCCTCTCGCGATTACAAGAACAAGACGACTATCACCATTGAAAGAAGAACAATGTCTAAAGAGGAAATAAGGAAGAACATTAGGCAAACTGAAAAGTACATGGCTGAAGACGAGGAGCTCAGGAAGAGGGTGAAAGCCAAAAACGCTTTGCAAACTTATGTCTTCAATATGCAGATTTCCATGGTCCACGATGAAGATCTTGGTCTAAGACTTGGGTGGGAAGACAGGAAAACTCTTGAAGAGGCCATTCTAAACGTGAATAAATGGCTTGAAAATGTAGTGATTGCCGGCGTCGATGACTACAAAAAAATGTTGAAGGAGCTTGACAGTGTTTGTTACCCAATAATTAACAAAATACACGAGGCTAGAAAAGGCAAGCTTCAGCGATCATCAACTGGCAGCCGACGTTTCGATGATCCAGAAGATATGACGATTCGGCATTGGAGCCATGGACATGTCCTTAAACTACTGCCGCTAGAGACGCCTTGTCTCTGCAATGGGTGTCAAGTTCTTGTGTTCAAACCATGTTACCAATGCGATCAAAATCTCTGCAACTATCGGCTTCACGAAGAATGTGCGATGGCTTCCTCAAATGGCTTCCACCCGTTTTTACGAGACTGCGAGTTCAAGTTTTACAGGCGCTACAAGAATCCAAACAACGAAACTTGTGATGGTTGCGGGAAGGACTTGAAAGGGTTCTTATATCAGTGCTCTCACAAGGAGCCACACAAGCTACACCCGTGTTGCCTAAAGCTCGAGAAAACCCTAGTTGGACATGGAGTCATGCTCCATCTCACCAAAAGCTCGTCTTCAAAGTGCGCAAAGTGTGGACAAAAGGAGGTCTTGAAGAGGTTCAAAGGATGGTCCTATGTTTCGAGCGATGGAAAATGCAGTTACCACGTGGCTTGTGTGAAGGACTTGTTCTACGAGCAATGGAAGGAGAATAATTTCTACAGAAGCCCAACGGGAAGAAGAAGCGGAAGGTATGAAAACATGGAGAATTTGGAAATGAGAATTACAGTTCCAAGCAAACAAACCGGAGAGTCTTCAATCGGGAAGAAGGTTGGAAAGTTTGCCAAGAACGCAAAGATCGCTCTCTTTCTCATTTTCTCGACTTTGTTTGGAGGCCCCTCAGATCGTCTCCTTGATCTTGCTGAAGCTTCTGTTCTGGAAAAGTGA 2685 45.74 LMAESGGPAIGIDLGTTNSCVGVWMNDRVEIIINEQGKRTTPSYVAFADSQRLIGDNAKRQVAVNPTNTVFDVKRLIGRKFSDEIVQNDLKLWPFRVVEGPRDEPEIVVIHRGQEKRMTPVEISAMVLEKMREIATAKLGCPVKNAVITVPAYFNDSQRQATMDAGVIAGLNVMRIINEPTAAAIAYGLDKKSDTGGRKTVLVFDLGGGTLDVSLLSIYHGNIEVKATNGDSHLGGEDFDNRMVNHFVDEFAIKTNQEIRGNPKAIRRLRNSCEEAKMLLSEAETASLSIDCLYIGIDFSSSITRAKFVEINRDLFRKCMKAVENCLADANMEKSYVDEVVLVGGSTRIPHLQYLLQDFFNGKQLCKSVNPDEAVAQGAAIQAAKMTGKCDGDLRNFNFSEVTPLSIAVETDSGEATVLIPKNSKIPIEKKYVCTTFEDNQTKIKILVYEGQGVDIAMKRNVIGSIELNGVPPAPKGSQKISLLFQINSNGILTMTAEDQTNASRDYKNKTTITIERRTMSKEEIRKNIRQTEKYMAEDEELRKRVKAKNALQTYVFNMQISMVHDEDLGLRLGWEDRKTLEEAILNVNKWLENVVIAGVDDYKKMLKELDSVCYPIINKIHEARKGKLQRSSTGSRRFDDPEDMTIRHWSHGHVLKLLPLETPCLCNGCQVLVFKPCYQCDQNLCNYRLHEECAMASSNGFHPFLRDCEFKFYRRYKNPNNETCDGCGKDLKGFLYQCSHKEPHKLHPCCLKLEKTLVGHGVMLHLTKSSSSKCAKCGQKEVLKRFKGWSYVSSDGKCSYHVACVKDLFYEQWKENNFYRSPTGRRSGRYENMENLEMRITVPSKQTGESSIGKKVGKFAKNAKIALFLIFSTLFGGPSDRLLDLAEASVLEK 894
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 21221426 21224287 + Bpe002194.1 Bpe15g01290 116969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g01290 894 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 37C-RELATED 5 629 - -
Bpe15g01290 894 Coils Coil 266 286 - -
Bpe15g01290 894 SUPERFAMILY Cysteine-rich domain 670 755 IPR046349 -
Bpe15g01290 894 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 548 626 IPR029048 -
Bpe15g01290 894 PANTHER HEAT SHOCK PROTEIN 70KDA 5 629 IPR013126 GO:0005524|GO:0140662
Bpe15g01290 894 Gene3D - 10 384 - -
Bpe15g01290 894 Gene3D - 192 366 - -
Bpe15g01290 894 SUPERFAMILY Actin-like ATPase domain 197 387 IPR043129 -
Bpe15g01290 894 Pfam Hsp70 protein 9 621 IPR013126 GO:0005524|GO:0140662
Bpe15g01290 894 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Bpe15g01290 894 ProSitePatterns Heat shock hsp70 proteins family signature 2. 203 216 IPR018181 -
Bpe15g01290 894 Coils Coil 522 542 - -
Bpe15g01290 894 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 392 552 IPR029047 -
Bpe15g01290 894 Gene3D Actin; Chain A, domain 4 235 318 - -
Bpe15g01290 894 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 393 548 IPR029047 -
Bpe15g01290 894 Gene3D - 71 126 - -
Bpe15g01290 894 PRINTS 70kDa heat shock protein signature 36 48 - -
Bpe15g01290 894 PRINTS 70kDa heat shock protein signature 337 353 - -
Bpe15g01290 894 PRINTS 70kDa heat shock protein signature 146 166 - -
Bpe15g01290 894 PRINTS 70kDa heat shock protein signature 209 219 - -
Bpe15g01290 894 PRINTS 70kDa heat shock protein signature 8 21 - -
Bpe15g01290 894 PRINTS 70kDa heat shock protein signature 396 415 - -
Bpe15g01290 894 PRINTS 70kDa heat shock protein signature 478 494 - -
Bpe15g01290 894 PRINTS 70kDa heat shock protein signature 58 66 - -
Bpe15g01290 894 PRINTS 70kDa heat shock protein signature 369 389 - -
Bpe15g01290 894 SUPERFAMILY Actin-like ATPase domain 8 191 IPR043129 -
Bpe15g01290 894 Gene3D - 549 624 IPR029048 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe13g01091 Bpe-Chr13:16453537 Bpe15g01290 Bpe-Chr15:21221426 0 dispersed
Bpe15g01290 Bpe-Chr15:21221426 Bpe15g01291 Bpe-Chr15:21225106 1.79E-28 tandem
Bpe01g00139 Bpe-Chr1:813834 Bpe15g01290 Bpe-Chr15:21221426 0 wgd
Bpe15g01290 Bpe-Chr15:21221426 Bpe02g00842 Bpe-Chr2:6219851 0 wgd
Bpe15g01290 Bpe-Chr15:21221426 Bpe04g01839 Bpe-Chr4:23662450 0 wgd
Bpe15g01290 Bpe-Chr15:21221426 Bpe04g00733 Bpe-Chr4:4708895 0 wgd
Bpe15g01290 Bpe-Chr15:21221426 Bpe08g00111 Bpe-Chr8:595957 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g01290 K03283 - mus:103968995 747.658