Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bpe15g01310 | ATGCAAGATGATCGCAAGGAAGTAAGTAGTAGAATTACAGGTGAGAAAGAACATATCTCGCAGGAAGATGAGTCAAAATTAAATGAGGATGCAGTAGATGTGAATGATGGAAGACAAATGGAAGCAACGCATTTCAAAGTTTGCACTCCGATGGGTTTGCAGAGATCACACCCGGAGTCACAAGAGCTTGCAGTTTGCTGGGAGAGATTTCTACCTCTTAGATCTCTGAAGGTCCTTCTGGTGGAAAACGATGATTCAACCCGCCATGTTGTGAGTGCTTTACTTCGAAATTGTGGCTATGAAGTTGCAGCTGTTGCAAATGGAATGCAAGCTTTGAAGATATTAGTAGATGTAACCTCCAAAGTTGATCTTGTTCTGACTGAAGTAGTCACTCCTCTTTTGTCAGGCATTGGCCTTTTATCCAAGATGATGACCCACAAAAATTGCAATAATATCCCTGTGATTATGATGTCATCTCATGATTCTATGAGTATAGTCTTTAAGTGTTTGTCAAAGGGTGCAGTTGACTTTTTAGTGAAGCCTATTCGAAAGAATGAGCTTAAAAACCTCTGGCAGCATGTTTGGAGGAAATGCCACAGTTATAGTGGTATACATACTACTAAGAAGTGTACAAGGTCAAGAAGTGCTGAAGAGTCAGATAACAACTCTGGTAGCAATGGTGAAGACAACAATGGAAGCAGTCGTTTGAATTTCAGGGATGGAAGTGATAATGGTAGTGGCACTCAGAGTTCTTGGACGAAAAGAGCTAGTCCCAAGCCAATGTCTTCTTGGGACCAGTTAGCTGATTCTCCATACAGCACTTGTGCCCAGGTTATTCATTCAGATCCCGAAGCATTGGGCAATGATTGGTTTCCCATGACTTCGACAAGGGGGTGTGAAAGCCAAGAAAAAGAACTTGGTGAAGACTTGGAGATTAGGAGACCAAGGGTTAAAAATGTGCCGCCGGAAATTGCAAGGAATAAGTCGCTAGCCTCTGTATCAGGGACCAATGTGGACAGAGTTTCTGAAACGAAGTCAAATAAAAATGATAAGCATCTGGAAAATGGACATAATGACATCAATGTTGAAGGCTCACGTGGCAAACCAAAGAACCAAGCGTCCACTCAACTACGTTTCATGGAAAATGACTGCAATCCCGGGTTAGAAAGTGCATTAGTTGATGTTCCAATAGGCAACTCCAAGAATTCTTTGAAAAAAGATGGTATGACATGTAATAACGATGAATTACCTTCCCTTGAGTTTAGTTTGAAAAGGCTGCAAGATGTCAGAGATATTGGGACTCGTGGTCCAGTTCAAAACACTCTACGGCATTCAGACCTCTCAGCCTTCTCAAGGTATCCTTACAAGTTATCCGTTCTACACATGCCTAATTTATTGAGTTTAGAATTTGAGGTGACAATATCTCTATCTTGCAGGTATAATTCTATAGCTGTGGCCAATCAAACTCATACAAGAAATCAGAGCTATTCTCGAATTGATAATAGTTCAGAGGCACCAAAAACAGAATCAATGCAGAATCTACAATCTTATTCTCTCAACACCCCTCTGAATCAGCAATCTAATGGCAGTAGCAACAACAATGATGTTGGCTCCACTACAGATAATGTCTTCAACAGGCCTATGGCAACAGGTGATCAGAATACAATTATCAATTACTCGGAGTCTTATGTTTTTCAATCCTCACTTAATTTCCCTTTATCAGAATTTCAACTTATGACTTCTGGTAAATCTGAGACAGAATTAGCAAGTACAAGTGCAGCAAAATTCAATGGTGCCAATCAGGTTCGAACGGCTAATCATCATCATTGCCACCACCATGTTGTTGACATTCCTGATCAGCTGCAGCTAGCCAATAATGGCGAGTTGTCTCAGAAAAATATTGCTGCGACAGATCTACATTGTGGTTCATCCAATACTTTAAATGGCAGTGCAACTGGAAGCAACTTTGGCATTGAAGGAAGCTGTGCAGCTTTTAATGCGAAAGAGTCGAACATGGAGATTGAGAACAGGCTAACTGGAAAAGACGAAGCTATTTGTGGACTAGGATCAGAGAGAAAGAGTGGACCTGATCAAAATCGATCTGCTCAAAGAGAAGCTGCTCTGAATAAATTTCGTCAGAAGAGGAAAGAGAGATGCTTTGAGAAGAAGGTCCGCTACCATAGTAGGAAGAAATTGGCGGAGCAACGACCCCGCTTTCGAGGACAATTTGTGCGACAGGCTTTACCCAAAGACAGACGCACATAG | 2265 | 41.46 | MQDDRKEVSSRITGEKEHISQEDESKLNEDAVDVNDGRQMEATHFKVCTPMGLQRSHPESQELAVCWERFLPLRSLKVLLVENDDSTRHVVSALLRNCGYEVAAVANGMQALKILVDVTSKVDLVLTEVVTPLLSGIGLLSKMMTHKNCNNIPVIMMSSHDSMSIVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRKCHSYSGIHTTKKCTRSRSAEESDNNSGSNGEDNNGSSRLNFRDGSDNGSGTQSSWTKRASPKPMSSWDQLADSPYSTCAQVIHSDPEALGNDWFPMTSTRGCESQEKELGEDLEIRRPRVKNVPPEIARNKSLASVSGTNVDRVSETKSNKNDKHLENGHNDINVEGSRGKPKNQASTQLRFMENDCNPGLESALVDVPIGNSKNSLKKDGMTCNNDELPSLEFSLKRLQDVRDIGTRGPVQNTLRHSDLSAFSRYPYKLSVLHMPNLLSLEFEVTISLSCRYNSIAVANQTHTRNQSYSRIDNSSEAPKTESMQNLQSYSLNTPLNQQSNGSSNNNDVGSTTDNVFNRPMATGDQNTIINYSESYVFQSSLNFPLSEFQLMTSGKSETELASTSAAKFNGANQVRTANHHHCHHHVVDIPDQLQLANNGELSQKNIAATDLHCGSSNTLNGSATGSNFGIEGSCAAFNAKESNMEIENRLTGKDEAICGLGSERKSGPDQNRSAQREAALNKFRQKRKERCFEKKVRYHSRKKLAEQRPRFRGQFVRQALPKDRRT | 754 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 15 | 21341436 | 21345764 | - | Bpe002214.3 | Bpe15g01310 | 116989 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bpe15g01310 | 754 | ProSiteProfiles | Response regulatory domain profile. | 77 | 195 | IPR001789 | GO:0000160 | |
| Bpe15g01310 | 754 | Pfam | CCT motif | 704 | 746 | IPR010402 | GO:0005515 | |
| Bpe15g01310 | 754 | MobiDBLite | consensus disorder prediction | 1 | 30 | - | - | |
| Bpe15g01310 | 754 | Gene3D | - | 75 | 231 | - | - | |
| Bpe15g01310 | 754 | Pfam | Response regulator receiver domain | 78 | 189 | IPR001789 | GO:0000160 | |
| Bpe15g01310 | 754 | MobiDBLite | consensus disorder prediction | 331 | 373 | - | - | |
| Bpe15g01310 | 754 | SUPERFAMILY | CheY-like | 74 | 203 | IPR011006 | - | |
| Bpe15g01310 | 754 | ProSiteProfiles | CCT domain profile. | 704 | 746 | IPR010402 | GO:0005515 | |
| Bpe15g01310 | 754 | SMART | REC_2 | 76 | 191 | IPR001789 | GO:0000160 | |
| Bpe15g01310 | 754 | MobiDBLite | consensus disorder prediction | 731 | 754 | - | - | |
| Bpe15g01310 | 754 | MobiDBLite | consensus disorder prediction | 343 | 364 | - | - | |
| Bpe15g01310 | 754 | MobiDBLite | consensus disorder prediction | 209 | 268 | - | - | |
| Bpe15g01310 | 754 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 14 | 733 | IPR045279 | GO:0009736 | |
| Bpe15g01310 | 754 | MobiDBLite | consensus disorder prediction | 490 | 547 | - | - | |
| Bpe15g01310 | 754 | MobiDBLite | consensus disorder prediction | 217 | 268 | - | - | |
| Bpe15g01310 | 754 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR-LIKE PRR37 | 14 | 733 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bpe04g00969 | Bpe-Chr4:6618978 | Bpe15g01310 | Bpe-Chr15:21341436 | 3.69E-15 | dispersed | |
| Bpe05g01054 | Bpe-Chr5:23071790 | Bpe15g01310 | Bpe-Chr15:21341436 | 1.45E-15 | dispersed | |
| Bpe07g00775 | Bpe-Chr7:14232191 | Bpe15g01310 | Bpe-Chr15:21341436 | 6.86E-20 | dispersed | |
| Bpe15g01310 | Bpe-Chr15:21341436 | Bpe13g00682 | Bpe-Chr13:13506862 | 1.53E-21 | dispersed | |
| Bpe15g01310 | Bpe-Chr15:21341436 | Bpe04g00712 | Bpe-Chr4:4590224 | 4.39E-07 | wgd |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 22675 | PF00072 | Response_reg | 8.90E-20 | CL0304 | Bpe | TR |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bpe15g01310 | K12129 | - | tcc:18586308 | 645.966 |