Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe15g01310 ATGCAAGATGATCGCAAGGAAGTAAGTAGTAGAATTACAGGTGAGAAAGAACATATCTCGCAGGAAGATGAGTCAAAATTAAATGAGGATGCAGTAGATGTGAATGATGGAAGACAAATGGAAGCAACGCATTTCAAAGTTTGCACTCCGATGGGTTTGCAGAGATCACACCCGGAGTCACAAGAGCTTGCAGTTTGCTGGGAGAGATTTCTACCTCTTAGATCTCTGAAGGTCCTTCTGGTGGAAAACGATGATTCAACCCGCCATGTTGTGAGTGCTTTACTTCGAAATTGTGGCTATGAAGTTGCAGCTGTTGCAAATGGAATGCAAGCTTTGAAGATATTAGTAGATGTAACCTCCAAAGTTGATCTTGTTCTGACTGAAGTAGTCACTCCTCTTTTGTCAGGCATTGGCCTTTTATCCAAGATGATGACCCACAAAAATTGCAATAATATCCCTGTGATTATGATGTCATCTCATGATTCTATGAGTATAGTCTTTAAGTGTTTGTCAAAGGGTGCAGTTGACTTTTTAGTGAAGCCTATTCGAAAGAATGAGCTTAAAAACCTCTGGCAGCATGTTTGGAGGAAATGCCACAGTTATAGTGGTATACATACTACTAAGAAGTGTACAAGGTCAAGAAGTGCTGAAGAGTCAGATAACAACTCTGGTAGCAATGGTGAAGACAACAATGGAAGCAGTCGTTTGAATTTCAGGGATGGAAGTGATAATGGTAGTGGCACTCAGAGTTCTTGGACGAAAAGAGCTAGTCCCAAGCCAATGTCTTCTTGGGACCAGTTAGCTGATTCTCCATACAGCACTTGTGCCCAGGTTATTCATTCAGATCCCGAAGCATTGGGCAATGATTGGTTTCCCATGACTTCGACAAGGGGGTGTGAAAGCCAAGAAAAAGAACTTGGTGAAGACTTGGAGATTAGGAGACCAAGGGTTAAAAATGTGCCGCCGGAAATTGCAAGGAATAAGTCGCTAGCCTCTGTATCAGGGACCAATGTGGACAGAGTTTCTGAAACGAAGTCAAATAAAAATGATAAGCATCTGGAAAATGGACATAATGACATCAATGTTGAAGGCTCACGTGGCAAACCAAAGAACCAAGCGTCCACTCAACTACGTTTCATGGAAAATGACTGCAATCCCGGGTTAGAAAGTGCATTAGTTGATGTTCCAATAGGCAACTCCAAGAATTCTTTGAAAAAAGATGGTATGACATGTAATAACGATGAATTACCTTCCCTTGAGTTTAGTTTGAAAAGGCTGCAAGATGTCAGAGATATTGGGACTCGTGGTCCAGTTCAAAACACTCTACGGCATTCAGACCTCTCAGCCTTCTCAAGGTATCCTTACAAGTTATCCGTTCTACACATGCCTAATTTATTGAGTTTAGAATTTGAGGTGACAATATCTCTATCTTGCAGGTATAATTCTATAGCTGTGGCCAATCAAACTCATACAAGAAATCAGAGCTATTCTCGAATTGATAATAGTTCAGAGGCACCAAAAACAGAATCAATGCAGAATCTACAATCTTATTCTCTCAACACCCCTCTGAATCAGCAATCTAATGGCAGTAGCAACAACAATGATGTTGGCTCCACTACAGATAATGTCTTCAACAGGCCTATGGCAACAGGTGATCAGAATACAATTATCAATTACTCGGAGTCTTATGTTTTTCAATCCTCACTTAATTTCCCTTTATCAGAATTTCAACTTATGACTTCTGGTAAATCTGAGACAGAATTAGCAAGTACAAGTGCAGCAAAATTCAATGGTGCCAATCAGGTTCGAACGGCTAATCATCATCATTGCCACCACCATGTTGTTGACATTCCTGATCAGCTGCAGCTAGCCAATAATGGCGAGTTGTCTCAGAAAAATATTGCTGCGACAGATCTACATTGTGGTTCATCCAATACTTTAAATGGCAGTGCAACTGGAAGCAACTTTGGCATTGAAGGAAGCTGTGCAGCTTTTAATGCGAAAGAGTCGAACATGGAGATTGAGAACAGGCTAACTGGAAAAGACGAAGCTATTTGTGGACTAGGATCAGAGAGAAAGAGTGGACCTGATCAAAATCGATCTGCTCAAAGAGAAGCTGCTCTGAATAAATTTCGTCAGAAGAGGAAAGAGAGATGCTTTGAGAAGAAGGTCCGCTACCATAGTAGGAAGAAATTGGCGGAGCAACGACCCCGCTTTCGAGGACAATTTGTGCGACAGGCTTTACCCAAAGACAGACGCACATAG 2265 41.46 MQDDRKEVSSRITGEKEHISQEDESKLNEDAVDVNDGRQMEATHFKVCTPMGLQRSHPESQELAVCWERFLPLRSLKVLLVENDDSTRHVVSALLRNCGYEVAAVANGMQALKILVDVTSKVDLVLTEVVTPLLSGIGLLSKMMTHKNCNNIPVIMMSSHDSMSIVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRKCHSYSGIHTTKKCTRSRSAEESDNNSGSNGEDNNGSSRLNFRDGSDNGSGTQSSWTKRASPKPMSSWDQLADSPYSTCAQVIHSDPEALGNDWFPMTSTRGCESQEKELGEDLEIRRPRVKNVPPEIARNKSLASVSGTNVDRVSETKSNKNDKHLENGHNDINVEGSRGKPKNQASTQLRFMENDCNPGLESALVDVPIGNSKNSLKKDGMTCNNDELPSLEFSLKRLQDVRDIGTRGPVQNTLRHSDLSAFSRYPYKLSVLHMPNLLSLEFEVTISLSCRYNSIAVANQTHTRNQSYSRIDNSSEAPKTESMQNLQSYSLNTPLNQQSNGSSNNNDVGSTTDNVFNRPMATGDQNTIINYSESYVFQSSLNFPLSEFQLMTSGKSETELASTSAAKFNGANQVRTANHHHCHHHVVDIPDQLQLANNGELSQKNIAATDLHCGSSNTLNGSATGSNFGIEGSCAAFNAKESNMEIENRLTGKDEAICGLGSERKSGPDQNRSAQREAALNKFRQKRKERCFEKKVRYHSRKKLAEQRPRFRGQFVRQALPKDRRT 754
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
15 21341436 21345764 - Bpe002214.3 Bpe15g01310 116989
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bpe15g01310 754 ProSiteProfiles Response regulatory domain profile. 77 195 IPR001789 GO:0000160
Bpe15g01310 754 Pfam CCT motif 704 746 IPR010402 GO:0005515
Bpe15g01310 754 MobiDBLite consensus disorder prediction 1 30 - -
Bpe15g01310 754 Gene3D - 75 231 - -
Bpe15g01310 754 Pfam Response regulator receiver domain 78 189 IPR001789 GO:0000160
Bpe15g01310 754 MobiDBLite consensus disorder prediction 331 373 - -
Bpe15g01310 754 SUPERFAMILY CheY-like 74 203 IPR011006 -
Bpe15g01310 754 ProSiteProfiles CCT domain profile. 704 746 IPR010402 GO:0005515
Bpe15g01310 754 SMART REC_2 76 191 IPR001789 GO:0000160
Bpe15g01310 754 MobiDBLite consensus disorder prediction 731 754 - -
Bpe15g01310 754 MobiDBLite consensus disorder prediction 343 364 - -
Bpe15g01310 754 MobiDBLite consensus disorder prediction 209 268 - -
Bpe15g01310 754 PANTHER TWO-COMPONENT RESPONSE REGULATOR 14 733 IPR045279 GO:0009736
Bpe15g01310 754 MobiDBLite consensus disorder prediction 490 547 - -
Bpe15g01310 754 MobiDBLite consensus disorder prediction 217 268 - -
Bpe15g01310 754 PANTHER TWO-COMPONENT RESPONSE REGULATOR-LIKE PRR37 14 733 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00969 Bpe-Chr4:6618978 Bpe15g01310 Bpe-Chr15:21341436 3.69E-15 dispersed
Bpe05g01054 Bpe-Chr5:23071790 Bpe15g01310 Bpe-Chr15:21341436 1.45E-15 dispersed
Bpe07g00775 Bpe-Chr7:14232191 Bpe15g01310 Bpe-Chr15:21341436 6.86E-20 dispersed
Bpe15g01310 Bpe-Chr15:21341436 Bpe13g00682 Bpe-Chr13:13506862 1.53E-21 dispersed
Bpe15g01310 Bpe-Chr15:21341436 Bpe04g00712 Bpe-Chr4:4590224 4.39E-07 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22675 PF00072 Response_reg 8.90E-20 CL0304 Bpe TR
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe15g01310 K12129 - tcc:18586308 645.966