Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe15g01323 | ATGGGAAAGGAGAAGGTTCACATCAACATTGTGGTCATTGGCCATGTCGACTCTGGGAAATCCACCACCACTGGGCACTTGATTTACAAGCTCGGTGGTATTGACAAGCGTGTCATTGAGAGATTTGAGAAAGAAGCTGCAGAGATGAACAAGCGTTCATTTAAGTATGCTTGGGTGTTGGACAAGCTCAAGGCTGAGCGTGAGCGTGGTATCACCATTGATATTGCCTTGTGGAAGTTCCAAACCACAAAATACTATTGCACTGTTATTGATGCCCCTGGACATCGTGATTTTATCAAAAACATGATTACTGGAACTTCCCAAGCTGATTGTGCTGTCCTTATCATCGATTCAACAACTGGAGGGTTCGAAGCAGGTATTTCAAAGGATGGTCAAACTCGTGAGCATGCTCTTCTTGCCTTCACCCTTGGAGTAAGGCAAATGATATGCTGCTGCAACAAGATGGACGCCACAACTCCCAAATATTCTAAGGCAAGGTATGACGAAATTGTGAAGGAAGTGTCCTCCTACATGAAGAAGGTTGGTTATAACCCTGATAAAATTCCCTTCGTCCCCATCTCTGGGTTTGAAGGTGACAACATGATTGAGAGGTCCACAAACCTCGACTGGTACAAGGGTCCAACCCTTCTTGAGTCCCTTGACTTGATCCTAGAACCCAAGAGACCTTCTGACAAACCTCTTAGGCTACCACTTCAAGATGTTTACAAGATTGGTGGTATTGGAACTGTTCCAGTGGGACGCGTTGAGACTGGTGTTCTGAAGCCCGGTATGGTGGTTACTTTTGCTCCTACTGGTCTGACAACTGAAGTCAAGTCTGTTGAAATGCACCATGAGGCTCTGCAAGAAGCTCTTCCAGAAACGGCTGAAACTAAACGTAAGAGTGCAAAGCGTGCCTTGAAATCAGAAAAGGAGTTTCTAGAGTACACCTTGAAGTATCAACAAGTTATTGCTGAAAGAGATGCAGGCAATTGTTACCTCTTATCTTCATATCTTCTATTTGTAGCCATTGCTGTCCGAGATAAGCTTGAGTCCCTATGTAGGGAGTTGCAACGTCAAAACAAGAAGCTTATGGATGAATGCAAGCGAGTTTCAGCTGAGGGACAAAATTTGAGATTGGATTTATCTTCAAAGTTTCAAGATGCAATCAAGGGGGTGAGCACTAGGCTAGAAGAGCAGAAGGATGAATGTCTCTCACAGCTGAAAGAGAATGAGATGTTGAGGACTAAATTAAAACAGCTTGTTGATCAGTATGCTCTTTCTGAACAACAAAATGCACAGAAGTTGAAGCAGAAAACTTTGGAACTTCAACTTTCTGACTTAAAGATTAAGCAATTTGAGGAGAAATTGGTTCAGGTACAGTCCCAAATGATGTTATATGCAGACCAAGTGTCACAATTATCAGCAACAGAAAACAATTTGCGCTTGCAGCTAGCATCTGATGGAGAAAATTTCCAACAATTCCAAATATATGAAGCATTGTCAAAGAGGAATGAGTTATTTGAAACCTTTAAGCAAGACATCGAGAAGATGGCAAAATCTATCAAGGAACTCAAGAAGGAAAATGCATTTTTGAAGACCAAAACGGAGCGATCTGACTTTACTTTGATAGAGCTTCTTGATGAGCGGGAGTCCTTGAAGAAACAGCTGGAGAAGACGAAGAACCAGAAAGAAAAGCTCGAATCACTCTGTCGATCAATGCAGGCAGAACGGAAACAAAGTTCAAATGAAAATAAAAGCTTAGATTCTGTTCCAGAGTGA | 1779 | 42.27 | MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFQTTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVRQMICCCNKMDATTPKYSKARYDEIVKEVSSYMKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLESLDLILEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPTGLTTEVKSVEMHHEALQEALPETAETKRKSAKRALKSEKEFLEYTLKYQQVIAERDAGNCYLLSSYLLFVAIAVRDKLESLCRELQRQNKKLMDECKRVSAEGQNLRLDLSSKFQDAIKGVSTRLEEQKDECLSQLKENEMLRTKLKQLVDQYALSEQQNAQKLKQKTLELQLSDLKIKQFEEKLVQVQSQMMLYADQVSQLSATENNLRLQLASDGENFQQFQIYEALSKRNELFETFKQDIEKMAKSIKELKKENAFLKTKTERSDFTLIELLDERESLKKQLEKTKNQKEKLESLCRSMQAERKQSSNENKSLDSVPE | 592 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 21413315 | 21428437 | + | Bpe002226.1 | Bpe15g01323 | 117002 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe15g01323 | 592 | Gene3D | - | 1 | 226 | IPR027417 | - | |
Bpe15g01323 | 592 | Coils | Coil | 507 | 534 | - | - | |
Bpe15g01323 | 592 | Pfam | Elongation factor Tu domain 2 | 248 | 293 | IPR004161 | GO:0005525 | |
Bpe15g01323 | 592 | MobiDBLite | consensus disorder prediction | 571 | 592 | - | - | |
Bpe15g01323 | 592 | SUPERFAMILY | Translation proteins | 231 | 292 | IPR009000 | - | |
Bpe15g01323 | 592 | Coils | Coil | 542 | 583 | - | - | |
Bpe15g01323 | 592 | Pfam | Elongation factor Tu GTP binding domain | 6 | 222 | IPR000795 | GO:0003924|GO:0005525 | |
Bpe15g01323 | 592 | Coils | Coil | 396 | 437 | - | - | |
Bpe15g01323 | 592 | Pfam | Myosin-like coiled-coil protein | 275 | 576 | IPR026183 | GO:0019905 | |
Bpe15g01323 | 592 | PRINTS | GTP-binding elongation factor signature | 9 | 22 | IPR000795 | GO:0003924|GO:0005525 | |
Bpe15g01323 | 592 | PRINTS | GTP-binding elongation factor signature | 88 | 98 | IPR000795 | GO:0003924|GO:0005525 | |
Bpe15g01323 | 592 | PRINTS | GTP-binding elongation factor signature | 68 | 76 | IPR000795 | GO:0003924|GO:0005525 | |
Bpe15g01323 | 592 | PRINTS | GTP-binding elongation factor signature | 104 | 115 | IPR000795 | GO:0003924|GO:0005525 | |
Bpe15g01323 | 592 | PRINTS | GTP-binding elongation factor signature | 148 | 157 | IPR000795 | GO:0003924|GO:0005525 | |
Bpe15g01323 | 592 | MobiDBLite | consensus disorder prediction | 573 | 592 | - | - | |
Bpe15g01323 | 592 | Coils | Coil | 449 | 469 | - | - | |
Bpe15g01323 | 592 | Gene3D | Translation factors | 229 | 297 | - | - | |
Bpe15g01323 | 592 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 3 | 249 | IPR027417 | - | |
Bpe15g01323 | 592 | ProSiteProfiles | Translational (tr)-type guanine nucleotide-binding (G) domain profile. | 5 | 230 | IPR000795 | GO:0003924|GO:0005525 | |
Bpe15g01323 | 592 | PANTHER | TRANSLATION FACTOR | 1 | 292 | - | - | |
Bpe15g01323 | 592 | CDD | EF1_alpha_II | 230 | 292 | - | - | |
Bpe15g01323 | 592 | CDD | EF1_alpha | 9 | 227 | - | - | |
Bpe15g01323 | 592 | PANTHER | ELONGATION FACTOR 1-ALPHA 1 | 1 | 292 | - | - | |
Bpe15g01323 | 592 | Coils | Coil | 342 | 373 | - | - | |
Bpe15g01323 | 592 | ProSitePatterns | Translational (tr)-type guanine nucleotide-binding (G) domain signature. | 61 | 76 | IPR031157 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe05g01143 | Bpe-Chr5:23694572 | Bpe15g01323 | Bpe-Chr15:21413315 | 0 | dispersed | |
Bpe13g00367 | Bpe-Chr13:11427618 | Bpe15g01323 | Bpe-Chr15:21413315 | 7.21E-70 | dispersed | |
Bpe13g00859 | Bpe-Chr13:14767824 | Bpe15g01323 | Bpe-Chr15:21413315 | 2.87E-56 | dispersed | |
Bpe15g00536 | Bpe-Chr15:16501481 | Bpe15g01323 | Bpe-Chr15:21413315 | 7.10E-71 | dispersed | |
Bpe15g00654 | Bpe-Chr15:17288699 | Bpe15g01323 | Bpe-Chr15:21413315 | 1.00E-33 | dispersed | |
Bpe15g01323 | Bpe-Chr15:21413315 | Bpe04g01679 | Bpe-Chr4:22788032 | 0 | wgd | |
Bpe15g01323 | Bpe-Chr15:21413315 | Bpe08g00145 | Bpe-Chr8:770039 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe15g01323 | K03231 | - | sind:105171896 | 586.26 |